Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0865 ATGTTCAAGAAATTAATGAAAGGAGGGCAAAAAAAGCCCTCCAAATCGGATTCAACCGATGGATATGGTCCACCGGCGAATAACGCCAATTCAACGGAAGCGGTGATTGTTCCACCACCGTCTGGAACAATTGAACCGCTTCCGTTGTTTCGCGACGTGCCGGTTTCTGAGAGGCAGAATTTGTTTATTCGGAAGCTTCAGATTTGTTGCCACACTTTGGATTTCACCGATACGATGAAATCGGTTAGGGAGAAAGAAATTAAGAGACAAGCGTTGATGGAATTGGTTGAATTTATTCAATCTGGTTCGAGTAAGATAAATGAGATTTGTCAGGAAGAGATGATCAAAATGGTGTCGGTGAATATTTTCCGGTGTCTTCCGCCGGCGTTTCATGAGAATACCGGACAAGATGCTACCGATCCGGAAGAAGAGGAACCGTGTTTGGAGCCGGCTTGGCCTCATTTGCAGCTCGTTTATGAGCTTCTTCTTAGATATGTTGTTTCATCTGATACTGATACAAAGGTAGCTAAACGTTACATTGATCATTCATTTGTGCTTAAATTGCTTGATTTGTTTGATTCTGAGGATCCTAGAGAACGTGAATATGTCAAAACTATCTTGCATCGTGTTTATGGAAAATTTATGGTTCATAGACCCTATATTAGGAAGGCTATTAACAACATATTTTATCGGTTTATATACGAGACTGAGAGACATAGCGGGATTACTGAGCTTCTTGAGATTCTCGGGAGTATCATTAATGGGTTCGCGTTGCCCATGAAGGAGGAGCATAAGTTGTTTCTTGTGAGGGCGTTGTTGCCTTTGCATAAACCGAAACCTGTTTCTGTGTATCATCAGCAGTTGTCTTACTGCATCTCTCAGTTTGTCGAGAAGGATTATAAGTTAGCGGATACTGTGATTCGGGGTTTGTTGAAATACTGGCCTGTGACTAATTGCCAGAAGGAAGTTCTATTTCTCGGGGAATTGGAGGAGGTTCTGGAGGCTACGCAAGCTGCGGAATTTCAACGCTGCATGGTTCTTCTTTTTAGACAGATTGCACGCTGCCTCAATAGTCCGCACTTTCAGGTTGCAGAACGAACCCTCTTTTTGTGGAATAATGAGCACATTGTCGGTTTAATTGCCCAAAACAGGACTGTAATATTGCCCATTATATTTGAAGCATTGGAGAAAAATGTCCAGAGTCATTGGAACCAGGCTGTTAATGGGTTGACTGTGAATGTTAGGAAAATGTTCCTGGAAATGGATGCTGAATTGTTTGAGGAGTGCCAGAGGCAGTATTTGGAGAAAGAAGCTAAAGCCAAAGAGGTGGAAGAGCTGCGGGAATTGAATTGGAAGAGACTGGCAGATGCCGCTGCACAGAATGGGGCGGATATGGTGACAGCTTAG 1407 0.4307 MFKKLMKGGQKKPSKSDSTDGYGPPANNANSTEAVIVPPPSGTIEPLPLFRDVPVSERQNLFIRKLQICCHTLDFTDTMKSVREKEIKRQALMELVEFIQSGSSKINEICQEEMIKMVSVNIFRCLPPAFHENTGQDATDPEEEEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYVKTILHRVYGKFMVHRPYIRKAINNIFYRFIYETERHSGITELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKPVSVYHQQLSYCISQFVEKDYKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVLLFRQIARCLNSPHFQVAERTLFLWNNEHIVGLIAQNRTVILPIIFEALEKNVQSHWNQAVNGLTVNVRKMFLEMDAELFEECQRQYLEKEAKAKEVEELRELNWKRLADAAAQNGADMVTA* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0865 468 MobiDBLite consensus disorder prediction 15 33 - -
Tpr6g0865 468 Gene3D - 54 457 IPR011989 -
Tpr6g0865 468 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 465 - -
Tpr6g0865 468 Coils Coil 426 446 - -
Tpr6g0865 468 SUPERFAMILY ARM repeat 59 440 IPR016024 -
Tpr6g0865 468 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 47 458 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tpr6g0865 468 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 465 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tpr6g0865 468 MobiDBLite consensus disorder prediction 1 33 - -
Tpr6g0865 468 PIRSF PP2A_B56 7 467 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0865 Tpr-Chr6 7441845 7451067 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0865 K11584 - gmx:100798308 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0865 6 7441845 7451067 Tpr6g0865 6 7441845 7451067 ECH