Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0852 ATGGTTTTGCAAGCAAACATTAATGTTCCACACTTTGCACTATTTCCCTTGATAGCACAAGGTCACATTATCCCAATGATAGACATAGCAAAACTCTTAGCACAACATGGTTCCATTGTTACCATTTTCACTACACCAAAAAATGCATCACGTTTTACTTCAGTTCTTTCTCGTGCTATTCTCAATGGTCTCCAAATCAAACTAATAACCCTAAATTTTCCATCAAAACAAGCTGGATTACCCGATGGTTGCGAGAATTTCGATATGGTTACCATTTCACAAGATATGATGTATAATCTTTTTCATGCAGTTTCTTTGCTTTATAAACAAGCAGATGAACTTTTTGATAAATTGTCACCAAAACCAAATTGCATTATCTCTGATTTTTGCATTCCTTGGACTTCTCAAATTGCTGAAAAACATCACATTCCTAGAATTTCATTTCATGGTTTTTCTTGTTTTTGTCTTCATTCCATTTTGAAGGTATTTACTTCAAATATTCTTGAAAGTATCGATTCAGATTCTGAGTTTTTCGCTATTCCTGATATACCTGATCAAATTCAAGTCACCAAAGAGCAGGTTCCAGGAGCAGTACAACTGGAAAGTCTAAAGGAATATGCTGAGAAAATGTTTGAAGCTCAAATGAAATCATATGGTGAAATCATAAACAGTTTTGAGGAGTTAGAGAAAGAATATGTTAAGGGTTACAAAAAGATGAGAAATGATAAGGTTTGGTGTGTTGGTCCTGTTTCACTTTGTAACAAAGATGGTTTAGATAAGGCTCAAAGAGGTAACATAGCTTCAATAAGTGAAAATAATTGCTTAAATTTTCTAGATTTACATAAGCCAAAATCTGTTGTTTATGTTTGTCTTGGAAGTTTAAGTAACTTAATTTCTTCACAACTTATTGAATTGGCTTTGGGATTAGAATCAACAAAAAGACCATTTATTTGGGTTATTAGGGATGGAATTGGTAAAAGTGAAGAGTTGGAAAAATGGATTAGTGATGAAAATTTTGAGGAAAGGAATGAAGGGAGAGGGTTAATAATTAGAGGGTGGGCCCCACAAATGGTGATATTGTCACATGGTTCCGTCGGTGGATTCTTGACACATTGTGGTTGGAATTCGACACTGGAAGGGATAAGTTTTGGTGTTCCGATGATAACTTGGCCGTTATTTGCTGATCAATTTTTGAATGAGAAACTTGTTACTCAAGTTTTGAGGATTGGTGTGAGTCTTGGTGTTGAGGTTCCATTGATGTGGGGAGAGGAAGAGAAGTTAGGTGTGGTTGTGAAGAAAGAAGGTATTAAGGAAGCAATATGTAATGTGATGGATGTGGAGGGAGAAGAGAGTAAAGAGAGAAGAGAAAGGGTTAGTGAACTTAGTGAGATTGCAAAAAGTGCTATTGAAAAAGGTGGATCTTCTTATCTTAATATTACTTTGCTTATACAAGATATCATGCAACTACAATCAAGCACCAAAGTTGAAACTTGA 1494 0.3507 MVLQANINVPHFALFPLIAQGHIIPMIDIAKLLAQHGSIVTIFTTPKNASRFTSVLSRAILNGLQIKLITLNFPSKQAGLPDGCENFDMVTISQDMMYNLFHAVSLLYKQADELFDKLSPKPNCIISDFCIPWTSQIAEKHHIPRISFHGFSCFCLHSILKVFTSNILESIDSDSEFFAIPDIPDQIQVTKEQVPGAVQLESLKEYAEKMFEAQMKSYGEIINSFEELEKEYVKGYKKMRNDKVWCVGPVSLCNKDGLDKAQRGNIASISENNCLNFLDLHKPKSVVYVCLGSLSNLISSQLIELALGLESTKRPFIWVIRDGIGKSEELEKWISDENFEERNEGRGLIIRGWAPQMVILSHGSVGGFLTHCGWNSTLEGISFGVPMITWPLFADQFLNEKLVTQVLRIGVSLGVEVPLMWGEEEKLGVVVKKEGIKEAICNVMDVEGEESKERRERVSELSEIAKSAIEKGGSSYLNITLLIQDIMQLQSSTKVET* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0852 497 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 488 - -
Tpr6g0852 497 PANTHER GLYCOSYLTRANSFERASE 6 493 - -
Tpr6g0852 497 Gene3D Glycogen Phosphorylase B; 272 470 - -
Tpr6g0852 497 CDD GT1_Gtf-like 10 468 IPR002213 GO:0008194
Tpr6g0852 497 Gene3D Glycogen Phosphorylase B; 5 271 - -
Tpr6g0852 497 PANTHER GLYCOSYLTRANSFERASE 6 493 - -
Tpr6g0852 497 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 284 406 IPR002213 GO:0008194
Tpr6g0852 497 ProSitePatterns UDP-glycosyltransferases signature. 353 396 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0852 Tpr-Chr6 7307622 7309729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0852 11 488 Glycosyltransferase AT2G36760 54.792 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0852 K13496 K22771 lja:Lj1g3v4690420.1 708.753