Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0851 ATGGCATCCCAAAATAAAAAAGTTCATTTTGTATTATTCCCAATGATGGCACAAGGCCACATGATCCCTATGATAGACATTGCAAAAATATTAGCAAAACATAACAATGTTAATGTTACAATAGTAACCACACCACAAAATGCATCACGTTACACATCAACCATAGCACGTTATATTGAATCTGGTTTACACATTCAATTAATTCAGCTTCAATTTCCATCTAAAGAGTTTGGATTACCAGAAGGGTGTGAAAATCTTGACATGTTACCATCACTTGGTATAGCATCAGATCTTTTCAATGCATCAAGATTACTAAAACAACAAGCTTTGAAGTTATGTGACGAGTTAACACCGCCACCAAGTTGCATAATTTCAGATATGTGTTTGCCATATACAATCCATATAGCTAGAAAATTCAATATTCCAAGAATTTCTTTTGTTGGAACAAGTTGCTTATATGTCTTAGCTTTGCATAATATACATGCTAATAATATGATGCAAATTATGGCTAATAAAGAAAATGAGTACTTTGATTTGCCTGGTATTTCTGAAAAAATTGAAATAACTATAGCACAAACAGGAATAGGATTACAGGGTGAAGCTTGGAATCAATTTAATGAAGATATGGGTGAAGCTGAAATGGGTTCATATGGGGTAATAGTGAATTCTTTTGAAGAGTTAGAGCCATCATTTGTGAAAGATTATAAAAAAGTAAACAATGACAAAGTTTGGTGTATTGGTCCTGTTTCACTTAGTAACATTGATTACTTGGATAAGGGGCAAAGAGGTAATAATAATAAGGTTTCAAGTGGTGAATGGAAGCACATGAAGTGGCTTGATTCTCAAAAGCAAGGGAGTGTTATCTATGTAAGCCTTGGAAGTTTATGTAATATAACACCAACACAAATGATAGAGCTTGGTTTAGCATTAGAAGCTACAAAAAGACCTTTTATTTGGGTTATTAGAGATGGAAATCAATTAGAAGCATTGGAAAAATGGGTTGAGGAAACTGGATTTGAAGGAAGAATCAATGGTAGAGGCCTAGTAATTAAGAGTTGGGCTCCTCAGTTATTGATATTGTCACATCGTTCAACCGGAGGATTCTTGACACATTGTGGTTGGAATTCGACTATTGAAGCAATATGTGCCGGTGTGCCAATGGTTACATGGCCACTTTTTGCTGACCAATTTTTGAATGAGACTTTAGCTGTGCAAATATTGAAAGTTGGTGTGAAAATTGGGGTTGAGAGTCCTTTGAATTGGGGTGTGGAAGAGGAAAGTAGTGTGTTGGTGAAGAAGGAAGATATCGTTAGAGGGATTGAAAGATTAATGGATGAGACAAGTGAAAGTGAAGAAAGAAGAAAAAGGATTAGAGAGCTTGCTAATATGGCTAAAAAGGCTGTAGAAAAAGATGGATCTTCTCATTCTAATGTTACTTTGTTCATCCAAGATATCATACAAAAAAATAAAGATATGATTCAAGGAACAGGAATAGAGGAGTTGAAGGAATTTGAGGAGAAAGTATATGATGTTGAAATAAAGTCAAATGGTGCAATCTTAAACACTTGTGAGAAGTTGGAGAAAGAATATGTCAAGGATTACAAGATGGAAAGAAATGATGAGGTTTGTAGTGTTGGCAAAGAGAGTTGTTGA 1653 0.3472 MASQNKKVHFVLFPMMAQGHMIPMIDIAKILAKHNNVNVTIVTTPQNASRYTSTIARYIESGLHIQLIQLQFPSKEFGLPEGCENLDMLPSLGIASDLFNASRLLKQQALKLCDELTPPPSCIISDMCLPYTIHIARKFNIPRISFVGTSCLYVLALHNIHANNMMQIMANKENEYFDLPGISEKIEITIAQTGIGLQGEAWNQFNEDMGEAEMGSYGVIVNSFEELEPSFVKDYKKVNNDKVWCIGPVSLSNIDYLDKGQRGNNNKVSSGEWKHMKWLDSQKQGSVIYVSLGSLCNITPTQMIELGLALEATKRPFIWVIRDGNQLEALEKWVEETGFEGRINGRGLVIKSWAPQLLILSHRSTGGFLTHCGWNSTIEAICAGVPMVTWPLFADQFLNETLAVQILKVGVKIGVESPLNWGVEEESSVLVKKEDIVRGIERLMDETSESEERRKRIRELANMAKKAVEKDGSSHSNVTLFIQDIIQKNKDMIQGTGIEELKEFEEKVYDVEIKSNGAILNTCEKLEKEYVKDYKMERNDEVCSVGKESC* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0851 550 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 495 546 - -
Tpr6g0851 550 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 489 - -
Tpr6g0851 550 CDD GT1_Gtf-like 9 481 IPR002213 GO:0008194
Tpr6g0851 550 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 487 - -
Tpr6g0851 550 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 280 400 IPR002213 GO:0008194
Tpr6g0851 550 Coils Coil 440 460 - -
Tpr6g0851 550 Gene3D Glycogen Phosphorylase B; 274 469 - -
Tpr6g0851 550 ProSitePatterns UDP-glycosyltransferases signature. 353 396 IPR035595 -
Tpr6g0851 550 PANTHER GLYCOSYLTRANSFERASE 495 546 - -
Tpr6g0851 550 PANTHER GLYCOSYLTRANSFERASE 7 489 - -
Tpr6g0851 550 Gene3D Glycogen Phosphorylase B; 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0851 Tpr-Chr6 7303856 7305886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0851 1 487 Glycosyltransferase AT2G36750 52.254 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0851 K13496 K22771 gmx:100527132 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0851 6 7303856 7305886 Tpr6g0851 6 7303856 7305886 ECH