Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0850 ATGGGATCACAAGATGCAAAGATCCACTTTGTGTTATTTCCATTGATGGCACAAGGTCATATGAATCCCATGATGGACATTGCAAAGATATTAGCACATCAACACAATGTTAATGTTACAATAGTAACCACTCCCCAAAATGCATCACGTTTCTCATCAATTCTAGCACGTTATCTTGACATTCAAGTAATTCAACTTCAATTTCCATGTAAAGAGTTTGGATTACCAGAAGGGTGTGAGAATCTTGATATGTTACCATCACTTGGTATAGCATCTGATTTCTTCAAAGCATCAAGATCTCTAAAACAAGAAGCTGAAAAGTTATTTGAAGAGTTAACACCACCACCAAGTTGCATAATTTCAGATATGTGTTTGCCATATACAATCCATATAGCTAGAAAATTCAATATTCCAAGAATTTCTTTTGTTGGAGTAAGTTGCTTATATCTCTTGGCTTTGCATAACTTACATGTCACTAATATGAATGAAACTATGGCTAATAATGAATCTGAGTACTTTGTTTTACCCGGTATCCCAGACAAAATTGAAATGACCATAGAACAATTAGGAGCAGGAAATAAGGGTGAAGCTTGGAAACAATTTAATGATGATGTGCTTGAAGCTGAAGTGGGTAGTTATGGGATACTCATGAATTCTTTTGAAGAATTAGAGCCAACATATGCAAGGGAATATAAAAAGGTAAGAAATGATAAAGTTTGGTGTATTGGTCCTGTTTCACTTAGTAACATTGATTATTTGGATAAGTTTCAAAGAGGTAATAAGAATAAGGATTCAATTGATGAATGGAAGCACATGAAGTGGCTTGATTCTCAAAAACAAGGGAGTGTTATATATGCAAGCCTTGGAAGTTTATGCAATATAGCACCAATTCAAATGATAGAGCTTGGTTTAGCATTAGAAGCTACAAAAAGACCTTTTATTTGGGTTATTAGATATGGAAATCAATTAGAAGTATTGGAAAAATGGATTGAGGAAAGTGGATTTGAAGGAAGAATCAAAGGCAGAGGCCTAGTAATTAAGGGTTGGGCTCCTCAGTTATTAATATTGTCCCATCGTTCAACCGGAGGATTCTTAACACATTGTGGTTGGAATTCGACTATTGAAGCAATATGTGCCGGTGTTCCAATGGTTACATGGCCACTTTTTGCTGACCAATTTTTGAATGAGACTTTAGCTGTGCAAATATTGAAAGTTGGTGTGAAAATTGGGGTGGAGAGTCCTATGAATTGGGGTAAGGAAGAAGAAAGTAGTGTGTTGGTGAAGAAGGAAGCTATCATTAGAGGAATTGAAAGATTAATGGATGAGTCAAGTGAAAGTGAAGAAATAAGAAAAAAGATTAAAGAGCTTGGTGAGATGGCTAAAAAGGCTGTAGAAAAAGATGGATCTTCTCATTATAATGTTACTTTGTTCATCCAAGATATAATACAAAAAAATAAAGATATGATTCAAGGATTAGGAACAGAGGAATTGAAGGAAATTGAGGACAAAATGTTAAATGTATGA 1524 0.3471 MGSQDAKIHFVLFPLMAQGHMNPMMDIAKILAHQHNVNVTIVTTPQNASRFSSILARYLDIQVIQLQFPCKEFGLPEGCENLDMLPSLGIASDFFKASRSLKQEAEKLFEELTPPPSCIISDMCLPYTIHIARKFNIPRISFVGVSCLYLLALHNLHVTNMNETMANNESEYFVLPGIPDKIEMTIEQLGAGNKGEAWKQFNDDVLEAEVGSYGILMNSFEELEPTYAREYKKVRNDKVWCIGPVSLSNIDYLDKFQRGNKNKDSIDEWKHMKWLDSQKQGSVIYASLGSLCNIAPIQMIELGLALEATKRPFIWVIRYGNQLEVLEKWIEESGFEGRIKGRGLVIKGWAPQLLILSHRSTGGFLTHCGWNSTIEAICAGVPMVTWPLFADQFLNETLAVQILKVGVKIGVESPMNWGKEEESSVLVKKEAIIRGIERLMDESSESEEIRKKIKELGEMAKKAVEKDGSSHYNVTLFIQDIIQKNKDMIQGLGTEELKEIEDKMLNV* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0850 507 PANTHER GLYCOSYLTRANSFERASE 7 485 - -
Tpr6g0850 507 CDD GT1_Gtf-like 9 463 IPR002213 GO:0008194
Tpr6g0850 507 Gene3D Glycogen Phosphorylase B; 1 270 - -
Tpr6g0850 507 Gene3D Glycogen Phosphorylase B; 271 465 - -
Tpr6g0850 507 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 485 - -
Tpr6g0850 507 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Tpr6g0850 507 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 275 396 IPR002213 GO:0008194
Tpr6g0850 507 Coils Coil 436 466 - -
Tpr6g0850 507 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0850 Tpr-Chr6 7298084 7300384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0850 8 483 Glycosyltransferase AT2G36750 53.750 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0850 K13496 K22771 gmx:100527132 644.039