Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0848 ATGGCATCCCAAAATCAAAAACTCCATTTTGTATTATTCCCAATGATGGCACAAGGCCACATGATTCCTATGATAGATATTGCAAAAATCTTAGCACAACATAACAATGTTAATGTTACAATAGTAACCACACCACAAAATGCATCACGTTACACATCAACCATAGCACGTTATATTGAATCTGGTTTACACATTCAATTAATTCAACTTCAATTTCCATCTAAAGAGTTTGGATTACCAGAAGGGTGTGAGAATCTTGACATGCTACCATCACTTGGTATAGCAACAGATTTCTTCAATGCATCAAGATTTCTAAAACAAGAAGCTGAAAAGTTATGTGAAGAGTTAACACCACCACCAAGTTGCATAATTTCAGATATGTGTTTGCCATATACAATTCACATAGCTAGAAAATTCAATATTCCAAGAATTTCTTTTGTTGGAGCAAGTTGCTTATATCTCTTGGCTATGCATAATATACATGCTAACAATTTGTTTCAAATTATGGCTAATAAAGAAAATGAGTACTTTGATTTGCCTGGTATTTCTGAAAAAATTGAAATAACTATAGCACAAACAAAACTAGGATTAAAGGGTGAAGCTTGGAATCAATTTAATATTGATTTGGGTGAAGCTGAAATGGGTTCTTATGGAGTAATAGTGAATTCTTTTGAAGAGTTAGAGCCATCATTTGTGAAAGATTATAAAAAAGTAAACAATGATAAAGTTTGGTGTATTGGTCCTGTTTCACTTAGTAACACTGATTACTTGGACAAGGGGCAAAGAGGTAATAATAAAAATGGAATAATTGATGAATGGAAGCACATGAAGTGGCTTGATTCTCAAAAGCAAGGGAGTGTTATTTATGTAAGCCTTGGAAGTTTATGCAATATAACATCAAAACAAATGATAGAGCTTGGTTTAGCATTAGAAGCTACAAAAAGACCTTTTATTTGGGTTATTAGAGATGGAAATCAATTAGAAGCATTGGAAAAATGGGTTGAGGAAAGTGGATTTGAGGGGAGAATTAATGGTAGAGGATTATTAATTAAGAGTTGGGCACCTCAGTTATTGATATTGTCACATCGTTCAACCGGGGGATTCTTGACACACTGTGGTTGGAATTCTACTATTGAAGCGATATGTGCCGGTGTTCCAATGGTTACATGGCCACTTTTTGCCGATCAATTTTTGAATGAGACTTTAGCTGTGCAAATATTGAAAGTTGGTGTGAAAATTGGGGTGGAGATACCTCTGAAATGGGGTGAGGAAGAAGAAAGTAGTGTGTTGGTGAAGAAGGAAGATATCATTAGAGGAATTGAAAGATTAATGGATGAGACAAGTGAAAGTGAAGATAGAAGAAAAAAGATTAGAGAGCTTGCTAATATGGCTAAAAAGGCTGTAGAAAAAGATGGATCTTCTAATTCTAATGTTACTTTGTTCATCCAAGATATCATACAAAAAAATAAAGATATGATTCAAGGAACAGGAACAGAGGAGTTGGAGGAAATTGAGGTGAAAATGTATGATGCTGAAATAAAGTCAAATGGTGCAATCATAAACACTTGTGAGGAGTTGGATAAGGTTTGTAGTGTTGGCAAAGAGAGCTTTTAA 1614 0.3432 MASQNQKLHFVLFPMMAQGHMIPMIDIAKILAQHNNVNVTIVTTPQNASRYTSTIARYIESGLHIQLIQLQFPSKEFGLPEGCENLDMLPSLGIATDFFNASRFLKQEAEKLCEELTPPPSCIISDMCLPYTIHIARKFNIPRISFVGASCLYLLAMHNIHANNLFQIMANKENEYFDLPGISEKIEITIAQTKLGLKGEAWNQFNIDLGEAEMGSYGVIVNSFEELEPSFVKDYKKVNNDKVWCIGPVSLSNTDYLDKGQRGNNKNGIIDEWKHMKWLDSQKQGSVIYVSLGSLCNITSKQMIELGLALEATKRPFIWVIRDGNQLEALEKWVEESGFEGRINGRGLLIKSWAPQLLILSHRSTGGFLTHCGWNSTIEAICAGVPMVTWPLFADQFLNETLAVQILKVGVKIGVEIPLKWGEEEESSVLVKKEDIIRGIERLMDETSESEDRRKKIRELANMAKKAVEKDGSSNSNVTLFIQDIIQKNKDMIQGTGTEELEEIEVKMYDAEIKSNGAIINTCEELDKVCSVGKESF* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0848 537 CDD GT1_Gtf-like 8 481 IPR002213 GO:0008194
Tpr6g0848 537 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 283 400 IPR002213 GO:0008194
Tpr6g0848 537 Gene3D Glycogen Phosphorylase B; 274 469 - -
Tpr6g0848 537 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 489 - -
Tpr6g0848 537 Coils Coil 440 460 - -
Tpr6g0848 537 Gene3D Glycogen Phosphorylase B; 1 273 - -
Tpr6g0848 537 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 487 - -
Tpr6g0848 537 ProSitePatterns UDP-glycosyltransferases signature. 353 396 IPR035595 -
Tpr6g0848 537 PANTHER GLYCOSYLTRANSFERASE 7 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0848 Tpr-Chr6 7291986 7293944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0848 1 487 Glycosyltransferase AT2G36750 53.279 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0848 K13496 - gmx:100527132 654.825