Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0847 ATGAAATCCGAAGATCCAAAGCTCCACTTTGTGTTGTTTCCAATGATGGCACAAGGTCACATGAATCCCATGATGGACATTGCAAAAATATTGTCACAACATAACAATGTTAATGTTACAATAGTAACCACTCCACAAAATGCATCACGTTTCTCATCAATTCTAGCACGTTATCTTAACATTCAAGTAATCCAACTCCAATTTCCATGTAAAGAATTTGGATTACCAGAAGGGTGTGAGAATCTTGACATGTTACCTTCACTTGGCATAGCCTCAAACTTCTTCAATGCAACAAAATTTCTACAACAAGAAGTTGACAAGCTATTTGAAGAGTTAACACCATCACCAACATGCATAATTTCAGATATGTGTTTGCCATATACAATCCATATAGCTAGAAAATTCAATATTCCAAGAATTTCTTTTGTTGGATCAAGTTGCTTTTATCTCTTGATTGTGCATAATTTATATGTCGCGAATATGAATGAAATTATGGCTAATAAAGAATCTGAGTACTTTGTTTTACCTGGTATACCTGACAAAATCGAAATGACCATAGCTCAAGCAGGAATAGGATATAAGGGTGAAGCTTGGAAGCAATTTAATGATGATGTGATTGAAGCTGAAATGGGTACTTATGGGATAATCATGAATTCTTTTGAAGAATTGGAACCAACATATGCAAGGGAATATAACAAGGTAAAAAATGATAAGGTTTGGTGTATTGGTCCTGTTTCACTCAGTAACACTGATTATTTGGATAAGTTTCAAAGAGGTAATGACAATAAGGATTCAATTGATGAATGGAAGCACATGAAGTGGCTTGATTCTCAGAAACAAGGGAGTGTTATCTATGCAAGCCTTGGAAGTTTATGTAATATAACATCAACACAAATGATAGAGCTTGGTTTAGCATTAGAAGCTACAAAAAGACCTTTTATTTGGGTTATAGGAGATGGAAATCAATTAGAAGAGTTGAAAAAATGGATTTATGAAAGTGGATTTGAGGGGAGAATCAATGGTAGAGGCCTAGTAATTAAGGGTTGGGCACCTCAGTTATTGATATTGTCACATTCTGCAACTGGAGGATTCTTGACACATTGTGGATGGAATTCTACTATTGAAGCAATATGTGCCGGTGTTCCAATGGTTACATGGCCACTTTTTGCCGATCAATTTTTGAACGAAAGTTTTGTTGTGCAAATATTAAAAGTTGGTGTGAAAATTGGGGTGGAGAGTCCTATGAAATGGGGTGAGGAAGAACAAAGTAGTGTGATAGTGAAGAAGGAAGATATCATTAGAGGAATTGAAAGATTAATGGATGAGTCAAGTGAAAGTGAAGAAATAAGAAAAAAGATTAGAGAGCTTGGTGAGATGGCTAAAAAGGCTATAGAAAAAGATGGAACTTCTCATTCTAATTTTACTTTGTTCATCCAAGATATCATACAAAAAAGTAAGGATATGTTTGAAGGAACAGGAACCGAGGAGTTGAAGGAAATTGCGGAGAAAATGTATGATGCTGAAATAAATGATAAGGTTTGTAGTGTTGGCAAAGAAAATTGTTGA 1566 0.3499 MKSEDPKLHFVLFPMMAQGHMNPMMDIAKILSQHNNVNVTIVTTPQNASRFSSILARYLNIQVIQLQFPCKEFGLPEGCENLDMLPSLGIASNFFNATKFLQQEVDKLFEELTPSPTCIISDMCLPYTIHIARKFNIPRISFVGSSCFYLLIVHNLYVANMNEIMANKESEYFVLPGIPDKIEMTIAQAGIGYKGEAWKQFNDDVIEAEMGTYGIIMNSFEELEPTYAREYNKVKNDKVWCIGPVSLSNTDYLDKFQRGNDNKDSIDEWKHMKWLDSQKQGSVIYASLGSLCNITSTQMIELGLALEATKRPFIWVIGDGNQLEELKKWIYESGFEGRINGRGLVIKGWAPQLLILSHSATGGFLTHCGWNSTIEAICAGVPMVTWPLFADQFLNESFVVQILKVGVKIGVESPMKWGEEEQSSVIVKKEDIIRGIERLMDESSESEEIRKKIRELGEMAKKAIEKDGTSHSNFTLFIQDIIQKSKDMFEGTGTEELKEIAEKMYDAEINDKVCSVGKENC* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0847 521 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 277 398 IPR002213 GO:0008194
Tpr6g0847 521 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 484 - -
Tpr6g0847 521 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 483 - -
Tpr6g0847 521 PANTHER GLYCOSYLTRANSFERASE 7 484 - -
Tpr6g0847 521 CDD GT1_Gtf-like 8 463 IPR002213 GO:0008194
Tpr6g0847 521 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Tpr6g0847 521 Gene3D Glycogen Phosphorylase B; 1 271 - -
Tpr6g0847 521 Gene3D Glycogen Phosphorylase B; 272 465 - -
Tpr6g0847 521 Coils Coil 446 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0847 Tpr-Chr6 7275801 7277571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0847 1 483 Glycosyltransferase AT2G36750 52.857 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0847 K13496 K22771 gmx:100777426 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0847 6 7275801 7277571 Tpr6g0847 6 7275801 7277571 ECH