Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0846 ATGAACTCAACACAATGTCACATTAATAATCTTCATTTCATATTCATTCCCTTAATGGCCCCTGGTCATCTTCTTCCAATGGTAGATATGGCAAAGTTACTAGCACGTCGCAAAGTTAAGGTAACAATAATCACCACACCCCTTAATTCCATTCAATTCAAATCAAGCATAGATAGAGAGATTCAATTAGGATCACAAATTCAAATTCTTCACATTAAATTTCCAAATGTAGAGTCAGGAATCCCTGAGGGATGTGAAAGTGTTGACACTTTACCTTCAATGGATTTAATGTCTAATTTTTACATAGCTTTATGTAAACTGAAAAGTCCACTAGAAAATATTTTTGAAAATTTAAGACCGGTTCCTAGTTGTGTGATTTCAGATAAACACATTTCGTGTGTAGCGGAAATTGCAATAAAATTCAAAGTTCCGAGAATTATATTCGACGGGACTAATTGTTTTCATTTATTGTGCAATCATAATTTGCGCAATTTAAAAGGTAGTATTCCTAATGAAGGAAAATTTGTTGTTCCGGGAATGCCAGATCAAATTGAATTGAGAAAATGTCAGCTTCCTGGACTGTTTAATCCTGGGGAAAATAAAAAGTTAAATAGTTTTCGCGAAGAAGTAAGGGAAATAGAAAAATATTCATATGGTATAGTCGTTAATAGTTTTGAAGAATTGGAAGAAGAATATGTTAAAGAATATAAAAGAGTAAGTGGTTATAAAGTATGGTGTGTTGGTCCTGTTTCATTATGTAACAATGATAAGTTGGATAAAGTTGAAAGAGGTAAAAAAATAATAAACTCAAATGATGAAAGTGAAAATAAAATTCTCAATTGGCTTGATTTATGGCCTTCAAATTCAGTTATTTATGTTTGTCTTGGTAGTTTAAACCGTGCAACACCTCAACAATTGAAAGAGGTAGGGTTAGGATTAGAGGCAACAAAAAGGCCATTTATTTGGGTGTTGAGGGGTGCATATGGAAAAGATGAAATGGATAAGTGGTTAATTGAAGAAGGGTTTGAGGAAAGGGTGAAAGATAGAGGGTTTTTGATAAAGGGTTGGGCACCACAAGTGTTGATTTTGTCACACAAAGCAATAGGTGTTTTTTTGACACATTGTGGATGGAATTCAACATTAGAAGGTATTTGTGGTGGGGTGCCTTTAGTAACTTTTCCTATGTTTGCTGAGCAATTTTATAATGAGAAAGTTGTGGTGCAAGTTGTGAAGAATGGTGTGAGTTTGGGAGCACAAAGTGCTGTGCATTTAGGAGAGGAAGAAAAGTGTGTTGTGGTTAAGAAGGAAAATGTTAGATTTGCTATTGAGAAGGTGATGGGTGAAGATGAAGAAAATGAAAAGATTAGGGAAAGTGCTAGAAAATATGGTGATCTTGCAAAGGAAGCATTAGAAGAAGGTGGCTCTTCTTATCACAACATGACTCAACTAATTGAAGATATAATGCATGTCCAAGGTTTATGTTAA 1485 0.3421 MNSTQCHINNLHFIFIPLMAPGHLLPMVDMAKLLARRKVKVTIITTPLNSIQFKSSIDREIQLGSQIQILHIKFPNVESGIPEGCESVDTLPSMDLMSNFYIALCKLKSPLENIFENLRPVPSCVISDKHISCVAEIAIKFKVPRIIFDGTNCFHLLCNHNLRNLKGSIPNEGKFVVPGMPDQIELRKCQLPGLFNPGENKKLNSFREEVREIEKYSYGIVVNSFEELEEEYVKEYKRVSGYKVWCVGPVSLCNNDKLDKVERGKKIINSNDESENKILNWLDLWPSNSVIYVCLGSLNRATPQQLKEVGLGLEATKRPFIWVLRGAYGKDEMDKWLIEEGFEERVKDRGFLIKGWAPQVLILSHKAIGVFLTHCGWNSTLEGICGGVPLVTFPMFAEQFYNEKVVVQVVKNGVSLGAQSAVHLGEEEKCVVVKKENVRFAIEKVMGEDEENEKIRESARKYGDLAKEALEEGGSSYHNMTQLIEDIMHVQGLC* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0846 494 CDD GT1_Gtf-like 11 476 IPR002213 GO:0008194
Tpr6g0846 494 ProSitePatterns UDP-glycosyltransferases signature. 356 399 IPR035595 -
Tpr6g0846 494 Gene3D Glycogen Phosphorylase B; 265 468 - -
Tpr6g0846 494 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 288 409 IPR002213 GO:0008194
Tpr6g0846 494 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 11 492 - -
Tpr6g0846 494 Gene3D Glycogen Phosphorylase B; 14 480 - -
Tpr6g0846 494 PANTHER GLYCOSYLTRANSFERASE 9 491 - -
Tpr6g0846 494 PANTHER GLYCOSYLTRANSFERASE 9 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0846 Tpr-Chr6 7266618 7268627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0846 10 490 Glycosyltransferase AT2G36780 48.765 5.67e-166 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0846 K13496 - gmx:100820150 663.685