Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0839 ATGTCTCCGGCAATGGCAATGAATGATGAAAGAATTGATGATAGTCATGCAATAGAAAATGAATATCATAAAGGAGTGAAGCATTTGTATGAGAAAGGCTTTCTTCACAAGGTACCAAAGAAGTATATATTTCCTGCTACTGAAAGACCAACAAGTATTGATGATTCAAATGTTGCTAAGGAAAAACTTCAGCTACCAATTATTGATTTTGCTGATCTTATTGGTCCAAATAGACCACAAGCTCTTCAGTCACTAGCCAATGCTTGTGAGAAATATGGCTTTTTCCAGCTAGTAAACCACAACATATCAGAAGATGTTACAAGGTGCATGGTAGATGTTGTAGGAAGGTTCTTTGATCTTCCATTAGAGGAAAGAGCTAAGTACATGACAAGTGATATGAGAGCACCTGTAAGATATGGGACCAGTTTCAGTCAAACAAAAGACTCTGTGTTTTGTTGGAGAGATTTCTTGAAACTCATTTGTCAACCTGATTACATTCCTCATTGGCCTGCTTCACCATTGGACTTTCAGGAAGTGGTAGCCACCTATACACAAGAAACCAAACATTTGTTCTTGGCAATAATGGAAGCCATTCTAGAAAGTTTAGGAATTATGGAAGACAACCAAGAAGAAGAGGCCAAAGAAAATGACAACAATAATAATAATATTATGAAAGAATTGGACAATGGTAGCCAAATGTTAGTAACAAATTTCTACCCACCATGTCCTGAACCAGACCTAACCTTAGGAATGCACCCTCATTCCGATTATGGTTTCCTCACACTTCTCCTTCAAGATGAAGTTGAAGGTTTGCAAATCCAATTTCAAGATAAATGGCTCACTGTTCAACCTATTCCCAATGCTTTTGTTGTCAATATTGGTGATCATTTAGAGATATTTAGCAACGGAAAATACAAGAGTGTGTTACACAGAGTTATGGTGAATGAAGCTAAGAGTAGAGTATCGGTTGCTTCGCTACATAGTCTTCCCTTTGAATGCACTGTGAGACCGTCACCAAAACTCATCGACGAAGAGAATCCAAAGCGTTACATGGACACAGATTTTGGTAGCTTTTTAGCATATGTGTCTACTAGAGAAACTAAGAAAAAGGATTTCTTAGAGTCCAGAAAATTGACATAA 1140 0.3746 MSPAMAMNDERIDDSHAIENEYHKGVKHLYEKGFLHKVPKKYIFPATERPTSIDDSNVAKEKLQLPIIDFADLIGPNRPQALQSLANACEKYGFFQLVNHNISEDVTRCMVDVVGRFFDLPLEERAKYMTSDMRAPVRYGTSFSQTKDSVFCWRDFLKLICQPDYIPHWPASPLDFQEVVATYTQETKHLFLAIMEAILESLGIMEDNQEEEAKENDNNNNNIMKELDNGSQMLVTNFYPPCPEPDLTLGMHPHSDYGFLTLLLQDEVEGLQIQFQDKWLTVQPIPNAFVVNIGDHLEIFSNGKYKSVLHRVMVNEAKSRVSVASLHSLPFECTVRPSPKLIDEENPKRYMDTDFGSFLAYVSTRETKKKDFLESRKLT* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0839 379 Pfam non-haem dioxygenase in morphine synthesis N-terminal 65 164 IPR026992 -
Tpr6g0839 379 Coils Coil 206 226 - -
Tpr6g0839 379 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 229 329 IPR005123 -
Tpr6g0839 379 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 16 377 - -
Tpr6g0839 379 Gene3D - 16 361 IPR027443 -
Tpr6g0839 379 Pfam 2OG-Fe(II) oxygenase superfamily 232 327 IPR044861 -
Tpr6g0839 379 PRINTS Isopenicillin N synthase signature 85 102 - -
Tpr6g0839 379 PRINTS Isopenicillin N synthase signature 254 275 - -
Tpr6g0839 379 PRINTS Isopenicillin N synthase signature 289 315 - -
Tpr6g0839 379 SUPERFAMILY Clavaminate synthase-like 24 365 - -
Tpr6g0839 379 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0839 Tpr-Chr6 7217873 7221190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0839 24 353 Glycosyltransferase AT5G59530 33.140 1.22e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0839 - - gmx:100778488 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0839 6 7217873 7221190 Tpr6g0839 6 7217873 7221190 ECH