Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0834 ATGTTTCGATTCTGGGGATCACAAGAGCAACAATCGCAGGATGGTTCTTCATCACAGTCATGGTATCCACAATCTGTGATGAGTTCATCGAGTTCTTCAAGGCCTGGTACACCTGCTTCATCTTCCGGTTCACCGAGACATTCGACTAGTCATGTTCCGCCGGCAGAAGCTGCCGGAACTATTGCTTCTTTGAGGGACAAGAGTGTTGATGAGTTAAGGAAGCTTTTATCTGATAAAGATGCGTATCAACAGTTTCTAAATTCACTTGACCAGGTCAAGATTCAAACCAATTTGAAAGATGAACTTTCCAAGGAGAATTTGCAGCTTGCAGAGGAGAATCTACTAAAGGAACCACGTATGGTGGAACTTAGGAATCAGTGTAGAATAATCCGGACAACCGAATTAGCTACTGCTATTGAGAAACTAAATGAGCTTGAGAAGCAGAAAGAAGAAATGTTGAAGTTAAATTCCCCTGCATCCCTTCTCCAAAGGATTCAAGAGTCTGTGAACCAGACAGATGAGGAATCTGAAAATCTGCACCAGCAACTCCTTGACAGAGAGGTTGACCTTGCAGCATTTTTGCAGAAATACAAGAAGCTACGCACCACTTACCACAAGAAAACTCTTATACATCTTGCTGCTAAAACATCAAATATATGA 660 0.4197 MFRFWGSQEQQSQDGSSSQSWYPQSVMSSSSSSRPGTPASSSGSPRHSTSHVPPAEAAGTIASLRDKSVDELRKLLSDKDAYQQFLNSLDQVKIQTNLKDELSKENLQLAEENLLKEPRMVELRNQCRIIRTTELATAIEKLNELEKQKEEMLKLNSPASLLQRIQESVNQTDEESENLHQQLLDREVDLAAFLQKYKKLRTTYHKKTLIHLAAKTSNI* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0834 219 SUPERFAMILY Endosomal sorting complex assembly domain 158 207 IPR037202 -
Tpr6g0834 219 Coils Coil 162 182 - -
Tpr6g0834 219 Pfam Modifier of rudimentary (Mod(r)) protein 66 209 IPR009851 -
Tpr6g0834 219 MobiDBLite consensus disorder prediction 1 59 - -
Tpr6g0834 219 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 1 219 - -
Tpr6g0834 219 MobiDBLite consensus disorder prediction 1 49 - -
Tpr6g0834 219 Gene3D Helix hairpin bin 141 211 IPR029012 -
Tpr6g0834 219 ProSiteProfiles VPS37 C-terminal domain profile. 139 219 IPR009851 -
Tpr6g0834 219 Coils Coil 135 155 - -
Tpr6g0834 219 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 1 219 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0834 K12185 - gmx:100305851 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0834 6 7167803 7172629 Tpr6g0834 6 7167803 7172629 ECH