Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0832 ATGAAGCTCTTGGAAAAAGATTTTGCTCTAAATCAAAGAGGAACTGTTAAAATTATTGCAGAGGAGCCCGATGATGTTTGGCTCCTTTACAATCTCATCACCATTGGCGATGTTGTCACCGCCGATACCACACGGAAAGTCCACCTCGAATCAAATAAAAACACTGCGTCACGTGTCAAACTCAACCTTCATCTCAAAGTCACGTGTCGTGACTTTCACAAAGACTCTTCTACCCTTCGCGTCCATGGACGCAACCTTGAATCAAACCAACATGTTGCTGCTGGCTCTTTCCACACTTTAACCCTCGAAATAAACAAACCATTTGACCTTCAAAAAAAGTTGTGGGGTCCAAATGCCGTCGAAACCTTAGCCGATGCCACCGAGAATAATAATAATTCTTCTTCGTCCGATGCAAATTTAGCCGTTGTTGTCATTCAACAACACCAAGCAGAGATTCACTTGCTTGGCAAAGGGGTCACCCATTGTTGCTCCAAGATCGAAGCATCTTCACGTTCACATTCACATAAAAAATCTTCTTCGTCCTCTAACGTGTTTTTTCGTGATGTTTTTGCAGCTTTTGTGAAGCATGTGGATTTCAAAGTTGTGCGAAGTGTAGTGATAGCAGGGGATAACGATGATAACGCAGCGTTATCCCCAGCTACTTTTCGTAGGTTTCTTTTGTCAGAAGCAAAAAAGTTAAGAATGAGATTTATCGAAGAGAACAAATCACGTATCGTCATTGTGGGGTCAAAATGTAATAACAAGGGTAATTGTGACTTTGACTTGAGGGAAGTTTTAAATGACATGGCAGTGATGAATTTGATAAAGGACAGTAATTTGGGCTTAGAGATTAGAACTTTTAAGGAATTGTGGGACATGGTATGTAACAATTCAGATCGTGTGTGTTATGGACCAAAACATGTGGAGAGTGCACATGAGATGAAAGCAATTGAGACACTTTTAATAAGTGATGATTTATATAAGAATGAAGAGATTGAGACAAGGAAAAAATATGTGAGTTTGGTGAAATCAGTGAAAGAAGGTGGAGGAAAGGCATTGGTGTATTCTTCTATGCATGTTTCAACACCACAATTGGCTCAACTAACTGGTGTTGCTGCCATTCTCAGATTTCCATTGCCTGGTCTTCAAGATATGGATGATGAATGA 1167 0.4019 MKLLEKDFALNQRGTVKIIAEEPDDVWLLYNLITIGDVVTADTTRKVHLESNKNTASRVKLNLHLKVTCRDFHKDSSTLRVHGRNLESNQHVAAGSFHTLTLEINKPFDLQKKLWGPNAVETLADATENNNNSSSSDANLAVVVIQQHQAEIHLLGKGVTHCCSKIEASSRSHSHKKSSSSSNVFFRDVFAAFVKHVDFKVVRSVVIAGDNDDNAALSPATFRRFLLSEAKKLRMRFIEENKSRIVIVGSKCNNKGNCDFDLREVLNDMAVMNLIKDSNLGLEIRTFKELWDMVCNNSDRVCYGPKHVESAHEMKAIETLLISDDLYKNEEIETRKKYVSLVKSVKEGGGKALVYSSMHVSTPQLAQLTGVAAILRFPLPGLQDMDDE* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0832 388 SUPERFAMILY Translational machinery components 136 278 - -
Tpr6g0832 388 SMART eRF1_1_2 1 128 IPR005140 -
Tpr6g0832 388 PANTHER PELOTA 1 386 IPR004405 GO:0070481|GO:0070966|GO:0071025
Tpr6g0832 388 Gene3D eRF1 domain 2 138 275 IPR042226 -
Tpr6g0832 388 Gene3D - 277 388 IPR029064 -
Tpr6g0832 388 Gene3D Pelota, domain A 1 129 IPR038069 -
Tpr6g0832 388 SUPERFAMILY L30e-like 283 383 IPR029064 -
Tpr6g0832 388 TIGRFAM pelota: mRNA surveillance protein pelota 2 379 IPR004405 GO:0070481|GO:0070966|GO:0071025
Tpr6g0832 388 Pfam eRF1 domain 3 284 379 IPR005142 -
Tpr6g0832 388 PANTHER EUKARYOTIC RELEASE FACTOR 1 (ERF1) FAMILY PROTEIN 1 386 - -
Tpr6g0832 388 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 127 IPR038069 -
Tpr6g0832 388 Pfam eRF1 domain 1 1 126 IPR005140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0832 Tpr-Chr6 7163864 7165384 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0832 K06965 - gmx:100803618 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0832 6 7163864 7165384 Tpr6g0832 6 7163864 7165384 ECH