Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0829 ATGGCGAGCGGTAGTAGTAGTAGAAAATCTCGACGGCGAAGAAGATCCGACGACTCTGCTTCAGAGTCGGATTCCGACCACCGCCGGAAAACTAGTCGGCGGTCACGGCGGGATTCAGATGATTCGAGTGACGACGATGATAGAAGTGGAAGAAAGAAAAAGTCTTCCAGAACAATCACAGATGAGGAAATTTCACAGTACATGGCTAAAAAAGCTCAGAGAAAGGCTACAAAAGTTGCAAAAAAATTGAAGACTAATACGGTGTCGGGTTATTCCAATGACTCTAATCCATTTGGTGATTCTAATCTCAATGAAAAGTTTGTTTGGCGCAAGAAGATTGAGCGGGATGTTACTCAAGGTGCATCTATTGATTCCTTTTCAATTAAAGCTGAGAAGAAAAGACAAGTAGAAAGGATGGCAGAAATTGAAAAGGTGAAAAAGAGGAGAGAGGAAAGGGCCCTTGAGAAAGCACAGCATGAAGAAGAAATGGCATTATTAGCTAGGGAGCGTGCTCGAGCTGAGTTCCAGGACTGGGAAAAAAAGGAAGAGGAGTTCCATTTTGATCAAAGCAAAGAAAGGTCAAAGATTAGATTGCGTGAAGGGCGTGCCAGGCCAATCGATGTCCTAACCAAGAACCTCAATGGATCTGATGATTTGGATATAGAAATAAATGAACCATACATGGTCTTCAAGGGTTTGACTGTTCAAGAAATGAGTGAACTTCGTGATGACATCAAAATGCATCTGGATCTTGACAGGGCAACACCAACCCATGTGGAATATTGGGAGGCTCTCCTTGTGGTGTGCGATTGGGAGCTAGCTGAATCTCGAAAAAAGGATGCAATTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCTGCTGAGTTGCTTGCTGAACAAAGGGGTCTACATTCGAGTGTTGAGCCAGACGTGAAGAACCTTTTACATGGAAAGACACGTACAGAATTGGAAGACTTGCAGGCTCACATTGAGTCAGAGATGCGTACTGGTACAGCAAAGGTGGTTGAGTACTGGGAGGCCATTTTAAAACACCTCCACATATACAAGGCCAAGGCTTGTTTAAAGGAAATCCATGCTAAAATGTTACGTAAGCATTTGCAACGTCTTGAGCAACCATTGGAGGATGAAGATAAACCGGAGAGTTCCCAGGACATGATACCTGAGGAGGCATATATTGAGGATGATGCTAAAGTCCATTCTGCAGATGAATCATTTTCACCAGAGCCTGTTAGAGAGATTCAAGAAGCTGAAGACGAGGCTGGATCATTTTCACCACAACTGTTGCATGATGATGAAAATGAGGAAGCTATTGATCCTGAAGAGGACAAAGCTATACTGGAGCGGAAACGTATGGCTGTAATAGAAGAGCAGCAAAGACGAGTTCAGGAAGCAATGGCATCAAAGCCAGCTCCATCTGAAGATAATTTAGAGATGAAAGCCTTTAAAGCTATGGGAGCTATGGAGGAGGGAGATGCAGTGTTTGGATCTGGAGCTGAAGTGAGCCTCGATTCGCAGGTTTATTGGTGGCATGACAAGTACAGACCAAGGAAGCCAAAGTATTTCAACCGTGTTCACACCGGATATGAGTGGAACAAATATAACCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTGCAAGGTTACAAGTTTAATATTTTCTATCCCGATCTTGTAGACAAGATAAAAGCCCCAAACTACACTATTGACAAGGATGGCAGCAATGGGGAAACTTGCATTATAAGATTCCATGCAGGGCCACCATATGAAGATATAGCTTTCCGCATTGTAAACAAAGAATGGGAATATTCTCACAAGAAAGGTTTTAAGTGCACATTTGAACGTGGAATTCTGCATGTGTACTTCAATTTCAAACGCCACCGTTACCGCCGATAA 1923 0.4342 MASGSSSRKSRRRRRSDDSASESDSDHRRKTSRRSRRDSDDSSDDDDRSGRKKKSSRTITDEEISQYMAKKAQRKATKVAKKLKTNTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVTQGASIDSFSIKAEKKRQVERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKERSKIRLREGRARPIDVLTKNLNGSDDLDIEINEPYMVFKGLTVQEMSELRDDIKMHLDLDRATPTHVEYWEALLVVCDWELAESRKKDAIDRARVRGEEPPAELLAEQRGLHSSVEPDVKNLLHGKTRTELEDLQAHIESEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKMLRKHLQRLEQPLEDEDKPESSQDMIPEEAYIEDDAKVHSADESFSPEPVREIQEAEDEAGSFSPQLLHDDENEEAIDPEEDKAILERKRMAVIEEQQRRVQEAMASKPAPSEDNLEMKAFKAMGAMEEGDAVFGSGAEVSLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPNYTIDKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0829 640 MobiDBLite consensus disorder prediction 405 439 - -
Tpr6g0829 640 Pfam Cactus-binding C-terminus of cactin protein 516 640 IPR019134 GO:0005515
Tpr6g0829 640 PANTHER BNAC05G02180D PROTEIN 20 640 - -
Tpr6g0829 640 Pfam Conserved mid region of cactin 168 365 IPR018816 -
Tpr6g0829 640 Coils Coil 140 176 - -
Tpr6g0829 640 MobiDBLite consensus disorder prediction 405 446 - -
Tpr6g0829 640 SMART CactinC_cactus_3 516 640 - -
Tpr6g0829 640 MobiDBLite consensus disorder prediction 1 80 - -
Tpr6g0829 640 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 20 640 - -
Tpr6g0829 640 MobiDBLite consensus disorder prediction 11 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0829 Tpr-Chr6 7139574 7146299 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0829 K25058 - gmx:100780087 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0829 6 7139574 7146299 Tpr6g0829 6 7139574 7146299 ECH