Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0819 ATGGGGGCCTCTTTGTCGAACCTTGGATCCAACGGTTCGACCATCGGTCCTAGTCTCGGCGATATACCTGAAAATTGTGTTGCTCGTGTTTTTCTTCATCTTACTCCTCCTGAGATTTGTAACTTAGCTCGTCTTAATCGCGCTTTTCGCGGCGCTGCTTCCGCTGATTCCGTTTGGGAATCTAAGTTACCTTCTAACTACCAACGTCTTCTCCGTTTAATGCCTCAACGCTTTCAGAATCTTTCTAAGAAAGATATTTACGCTCTTCTTTCAAAACCGTTACCGTTTGATGACGGTAATAAGCAATTGTGGCTTGATAGGGTTACTGGTAGGGTTTGTTTGTCGATTTCGGCCAAAGGTTTGTTGATTACTGGAATTGATGATCGGAGATACTGGACTTGGGTTCCAACTGAAGAATCTAGGTTCAATGTTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTCGACTTTCCATTTCCTGCTGATAGTTATACACTCTCCTTTAGGCTTCACCTTGGACGATTTTCCAAAAGGCTTGGCCGGCGTGTATGCAATTATGAACAGACCCATGGTTGGGATATAAAGCCTGTAATATTTCAGTTGTCAACTTCGGATGGTCAGCAAGCATCGTCTGAGTGCTGCTTGGATGAAACTGAGCACGATGATACATATGGAAATCATAAACGAGGATATTGGGTTGATTACAAGGTAGGCGAGTTTATTGTGAGTGGATCTGAACCTACAACTAAAGTTAGATTCTCCATGAAACAGATTGATTGTACACACTCAAAAGGGGGGCTTTGTGTAGATTCTGTATTTATCATACCTAGCGATTTGAGAGACCGCAAGGGAGGCGGCTTTTTGAAATGA 885 0.4316 MGASLSNLGSNGSTIGPSLGDIPENCVARVFLHLTPPEICNLARLNRAFRGAASADSVWESKLPSNYQRLLRLMPQRFQNLSKKDIYALLSKPLPFDDGNKQLWLDRVTGRVCLSISAKGLLITGIDDRRYWTWVPTEESRFNVVAYLQQIWWFEVDGEVDFPFPADSYTLSFRLHLGRFSKRLGRRVCNYEQTHGWDIKPVIFQLSTSDGQQASSECCLDETEHDDTYGNHKRGYWVDYKVGEFIVSGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRDRKGGGFLK* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0819 294 PANTHER F-BOX PROTEIN PP2-A15 1 288 - -
Tpr6g0819 294 SUPERFAMILY F-box domain 17 87 IPR036047 GO:0005515
Tpr6g0819 294 Pfam Phloem protein 2 112 281 IPR025886 -
Tpr6g0819 294 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Tpr6g0819 294 PANTHER F-BOX PROTEIN PP2-A15 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0819 Tpr-Chr6 7038731 7042467 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0819 - - gmx:100807328 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0819 6 7038731 7042467 Tpr6g0819 6 7038731 7042467 ECH