Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0775 ATGAATGTCCATCTCCATCCATCCATCCACTTTCTTTTCCTAAACATGTCTGCAACTCATCACCTTCTTCAATTCACAATCATCCTCATTCTATCCCTCTCAACATCATCTTTAACAACTTCAATCCCACAAGAGCTTCTCAAAGGCTTCTCCACAGTTCCACTCTCATCATCATCATCATCATCATCATCACCTTCAACATCTTTTCAACCCATTCTCACCGACCCAACCGGTAACTTCTCTCTTGGCTTCCTCCGCCAAAACCAAAACGATCTACAACTAGCCATCATTCACACACCTTCCTCCCAAACATTCTGGATCGCTAACCCAACTCACTCCTTTTCTTGGTCACACACCACCCGCTTCTTCTTCAACGGCAGCCTTGTTTTGTGGGATCCACAAAGAACCCTCACCTGGTCAACCGCCACTGACGGTGACCGTGTGATTCTCCTCAACAACTCAAACTTACAAGTTCAAACCAAAAATGCTGCACCACTTTGGGAAAGTTTTCATTTTCCCACAAATACCCTTGTTCAGAATCAAAATTTCACTTCTAACATGTCGTTAGTTTCTTCTAACGGTCTTTATTCTTTAAGGTTAGGTGATACTTTCATGGGTTTATACGAAAACAACGGCCAAGAAAAAGGAAGGTCGTTATCAAAACGGTTATTTCTGTTATACTGGAAACGAACGGCGTTAGAAGCTAAAGCTTTAATAGTTAACGGTGAAGGACCCATTTATGCAAGAGTTACCACAGAGGGTTATATTGGAATGTACCAAACTAGCCCTAAACCTGTTGATGTTCAGAAGTTTAATAGTTTTCAACAAACGTCGTCGTTTCTTTTGGTTCGGTTAGAATCTGATGGAAATCTTAAAGGGTATTATTGGGATATAACAAAGTCTAGTTGGATGCTTAATTTTCAAGCTATTACTGAAACTTGTGAGCTTCCTAATCCGTGTGGTTCGTACGGTTTATGTATTCCTGGTGGGTCTAGTTGTTCTTGTTTAGATAATAAAACCCGGTTTGAACCGGGTGAGTCGGGTGAACCGGGTAGTTGTTTTAATAATGATGGTGGTGGTGGTGGAGATGGAGGATTGTGCGGTGGTGATGGGATTGGCGGAGATAATGGTTACTATGTTTTGAGAAGAAACGGAGTGGAGCCACCGCATAAGGAGTTATTAGAGGAAGTAACGACGTTATCTTCAACGGAATGTGAAAATTTGTGTGAGAAAGATTGTAGGTGTTGGGGAGCATTGTATAATAATCAAACCGGGTTTTGTTATGTTTTGGATTATCCAATTGGGACAATGTTGGGAACAAGGGATGAGTCAAAGGTGGGTTATTTTAAGGTGAGGAAAGGTGCTCGGAAGAGGAATAAGGTTGGGGTTATAATTGGAATTGTGGTTGGTCTTTTGTTTGGTGTTGTTGTTATTGGTGTTGGGATTTGTGTAATGAGGTGGAAAAAAAAGAAAGGGAATCTAAAAGAGGAAGATGGGAATTGGGCTTCACCCGGCCCGTATAGGAATCTTGGATCCGAAAGTTTTAGATCCGTTGAGTTGTCGGGTAGTGCTCAATAA 1578 0.4151 MNVHLHPSIHFLFLNMSATHHLLQFTIILILSLSTSSLTTSIPQELLKGFSTVPLSSSSSSSSSPSTSFQPILTDPTGNFSLGFLRQNQNDLQLAIIHTPSSQTFWIANPTHSFSWSHTTRFFFNGSLVLWDPQRTLTWSTATDGDRVILLNNSNLQVQTKNAAPLWESFHFPTNTLVQNQNFTSNMSLVSSNGLYSLRLGDTFMGLYENNGQEKGRSLSKRLFLLYWKRTALEAKALIVNGEGPIYARVTTEGYIGMYQTSPKPVDVQKFNSFQQTSSFLLVRLESDGNLKGYYWDITKSSWMLNFQAITETCELPNPCGSYGLCIPGGSSCSCLDNKTRFEPGESGEPGSCFNNDGGGGGDGGLCGGDGIGGDNGYYVLRRNGVEPPHKELLEEVTTLSSTECENLCEKDCRCWGALYNNQTGFCYVLDYPIGTMLGTRDESKVGYFKVRKGARKRNKVGVIIGIVVGLLFGVVVIGVGICVMRWKKKKGNLKEEDGNWASPGPYRNLGSESFRSVELSGSAQ* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0775 525 SUPERFAMILY alpha-D-mannose-specific plant lectins 103 175 IPR036426 -
Tpr6g0775 525 PANTHER OS11G0149900 PROTEIN 32 512 - -
Tpr6g0775 525 ProSiteProfiles PAN/Apple domain profile. 367 453 IPR003609 -
Tpr6g0775 525 Pfam S-locus glycoprotein domain 274 337 IPR000858 GO:0048544
Tpr6g0775 525 ProSiteProfiles Bulb-type lectin domain profile. 58 171 IPR001480 -
Tpr6g0775 525 Gene3D - 58 172 IPR036426 -
Tpr6g0775 525 CDD EGF_CA 314 335 - -
Tpr6g0775 525 Pfam D-mannose binding lectin 105 194 IPR001480 -
Tpr6g0775 525 PANTHER - 32 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0775 Tpr-Chr6 6548961 6551188 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0775 - - cam:101498584 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0775 6 6548961 6551188 Tpr6g0775 6 6548961 6551188 ECH