Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0770 ATGAAAACCAATAATTACAATGAGGAAGAAACCAATGGTAATCACCATGTGATAGATATCTTCAAAATAGACACAGAAAGGTTAGCTTCAATGCAAAACAAAATTTCAGAAAACCCAAAATTGTTAAGCAAATCCGCAGGAAAAACATCTTGTTGCATCTTCAAGGTACCACAAAGCCTAATTGAAGCAAATGGAAAAGCATACCAACCTCGTATAGTTTCCATAGGACCTTACCATCGTGGACAACCTCGTTTCAACATGATCGAAGAACATAAATATCGTTACCTCGGTTCTCTTCTCACAAGAACACAATTACCCTTAGAGGAATTGTTAAAAGCCATTGCTCCATTAGAAAATGAAGCTAGAGAGTGTTACTCCGAAACAATTCAGCTTGATCCGCACGAATTCGTTGAAATGTTGGTTCTCGATGGTTGTTTCATTATAGAGTTGTTTCGAAAAGTTGCAAGATTAGTACATTTTGAAGTTGATGATCCACTTGTTAACATGGCATGGATTTTACCATTTTTTTATAGAGATTTTCTTAAGCTTGAAAATCAAATCCCTTTCTTTATTCTTCAACGCTTATTCGAAATTTCAAAACCACCTCATGAAAATTCAACGGTAACCCTTTCATTTCTTGCTATGGAATTCTTCAACAACTCGTTACAAAGACCGGAAGAAGTAGTTAAAGTGATAACCTATAAAAATGAAGTAAAAGGGAAGCATTTACTCGATTTGGTTCGTTCGAGTTTTATTCCAATCGATGAATTAGAAAAAGAACACCAAAGTGTCACTACACCAACCCACGTGATCCATTGTGTCTCAAAACTTCGTCGCGCGGGGATTAAGATCAATCCAGGAAAAAACAACGAAAAAGAGAGTTTCTTGAAAGTGAAATTCAAACACGGCGTGATAGAAATGCCAACAATAACAATGGACGATTTCATGAGTTCATTTTTATCAAACTGTGTCGCATTCGAACAATGTTACATTGGTTGTTCAATGAAATATGTAACAACCTATGTAACATTTTTGGATTGTTTAATAAATACTTATAGAGATGTTGAGTATTTATGTGATAGGAACATAATTGAGAACCATTTTGGAACAGAAGGTGAAGTGGCAAGTTTTATTAACAATGCTGGAAAAGATGTTGCAGTTGATTTTGATTCATGTTATTTGTCTAGTTTGTTTAATGAGGTTCATGAATATTATAGAAATAGTTGGCATGTTCAATGGGCTAGTTTTAAATACACTTATTTTGATACACCTTGGTCGTTTATATCTGCTTTGGCTGCATTGGTATTGTTGGTTCTTACGGTTGGTCAGACATATTTTGCAGCTTATCAGTATTTTGATGCCTAA 1365 0.3473 MKTNNYNEEETNGNHHVIDIFKIDTERLASMQNKISENPKLLSKSAGKTSCCIFKVPQSLIEANGKAYQPRIVSIGPYHRGQPRFNMIEEHKYRYLGSLLTRTQLPLEELLKAIAPLENEARECYSETIQLDPHEFVEMLVLDGCFIIELFRKVARLVHFEVDDPLVNMAWILPFFYRDFLKLENQIPFFILQRLFEISKPPHENSTVTLSFLAMEFFNNSLQRPEEVVKVITYKNEVKGKHLLDLVRSSFIPIDELEKEHQSVTTPTHVIHCVSKLRRAGIKINPGKNNEKESFLKVKFKHGVIEMPTITMDDFMSSFLSNCVAFEQCYIGCSMKYVTTYVTFLDCLINTYRDVEYLCDRNIIENHFGTEGEVASFINNAGKDVAVDFDSCYLSSLFNEVHEYYRNSWHVQWASFKYTYFDTPWSFISALAALVLLVLTVGQTYFAAYQYFDA* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0770 454 Pfam Plant protein of unknown function 53 439 IPR004158 -
Tpr6g0770 454 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 13 451 IPR004158 -
Tpr6g0770 454 PANTHER - 13 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0770 Tpr-Chr6 6480287 6482032 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0770 - - adu:107493758 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0770 6 6480287 6482032 Tpr6g0770 6 6480287 6482032 ECH