Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0763 ATGGTTTACACTATATCAGGAATTCGATTTCCCGTTATTCCTTCTCTGCAAAACTCGACGACGATACGTGGCGTCGCCGATCGAAGACCTTCTTCTTCATCTCACTCATTTCTTCTCAACAAAAAGAACTACTCATCACTCTCTCGGACATCACTTTATGCAAAGTTTTCCCGCGATTCTGAAACCAAGTCTTCCACAATTGCCGAATCTGATAAAGTACTTATTCCAGAAGATCAAGATGACTCTGCATCCGTGACGGATCAACTTGAAAATCCTGATATAACCACAGAGGATGCACAGAACTTGGAGGATTTAACTATGAAAGATGGGAATAAGTACAATCTTGATGAAGCAGCTAGCAGTTTTAGAGAGGTTGGGGATGCGAAAGGTTCTGTTGTGTCATCGTCACTTGTAGATGTTAACACCGACGCTCAAGTCAAGAAGACATCAGTTCATTCAGACAAGAAAGTAAAAATAGATAAACCTAAGATCATTCCTCCACCTGGTACTGGGCAGAAAATATATGAGATTGATCCATTTTTAGAAGCTCACCGTCAGCATCTTGATTTCCGTTATGGACAATACAAAAAAATTCGGGAGGAAATTGACAAGTATGAAGGTGGTCTTGATGCATTTTCTCGTGGGTACGAAAAGTTAGGCTTCACACGCAGTGCTACAGGCATTACTTACAGAGAGTGGGCACCTGGAGCTAAGTCAGCAGCATTAGTTGGAGATTTCAACAATTGGAATCCAAATGCAGATGTAATGACCCGGGATGATTTTGGTGTGTGGGAGATCTTCTTGCCAAACAATGCTGATGGTTCACCGCCAATTCCTCATGGTTCTCGAGTCAAGATCCACATGGATACTCCCTCTGGGATCAAGGACTCTATTTCTGCTTGGATCAAATTCTCTGTACAGGCTCCTGGTGAAATTCCATATAATGGAATATACTATGATCCCCCAGAGGAGGAAAAATATGTCTTCAAACATCCACAGCCAAAGCGACCAGACTCGATTAGAATATACGAGGCACACATTGGAATGAGTAGCCCGGAGCCAAAAATCAACACATATGCCAATTTTAGAGATGATGTACTACCTCGCATTAAAAAGCTTGGCTATAATGCTGTCCAGATTATGGCTATCCAAGAACATTCTTACTATGCTAGCTTTGGGTATCATGTTACTAATTTCTTTGCACCTAGCAGTCGGTTTGGAACTCCGGAAGATCTTAAGTCTCTGATAGACAGAGCCCATGAACTAGGCCTGCTTGTCCTGATGGATATTGTACATAGCCATGCATCAAATAATACATTGGATGGGCTGAACATGTTTGATGGAACTGATGGTCATTACTTCCATCCTGGGTCACGGGGTTATCATTGGATGTGGGATTCTCGCCTTTTTAACTATGGAAGCTGGGAAGTCCTAAGGTATCTACTTTCAAATGCAAGATGGTGGCTTGATGAATATAAGTTTGACGGGTTTCGATTTGACGGTGTCACATCAATGATGTACACTCATCATGGACTGCAGGTAGCATTTACTGGAAATTACAATGAGTATTTTGGTTTTGCAACTGATGTTGAAGCTGTGGTTTACCTGATGCTGGTTAATGATCTCATTCATGGGCTCTTCCCTGAAGCCGTTTCAATTGGTGAAGATGTGAGTGGAATGCCAACATTCTGCCTTCCGACGCAAGATGGTGGGATTGGCTTTAACTACCGCTTGCATATGGCCGTTGCAGACAAGTGGATTGAGCTTCTCAAGAAAAAAGATGAAGACTGGAGAATGGGTGATATAGTCCACACACTAACAAACAGAAGGTGGCTGGAAAATTGTGTGGTTTATGCTGAAAGTCATGACCAAGCCTTGGTTGGTGACAAGACACTAGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCTTTAGACAGACCATCTACTCCTCTAATAGATCGTGGTATTGCATTACACAAAATGATTAGGCTTATTACTATGGGCCTTGGTGGTGAAGGATATTTGAATTTTATGGGGAATGAGTTCGGCCATCCTGAGTGGATCGATTTTCCAAGGGGTGATCAACATCTTCCTAATGGCAAAGTGGTTCCTGGAAATAACAACAGTTTTGATAAATGCAGACGTAGATTTGACTTGGGTGATGCAGATTATCTAAGATATCGGGGAATGCAAGAATTTGATCGAGCTATGCAGCACCTAGAAGAAAGATATCATTTCATGATTTCTCAGCACCAATATATTTCACGGAAAAATGAAGGTGACAAAGTTATAATCTTCGAGAGGGACAACCTGGTCTTTGTATTCAATTTCCACTGGACCAACAGTTATTCAGATTACAAAGTTGGCTGTTTAAAGCCAGGGAAATATAAGATTGTCTTGGATTCAGATGATGCCTTGTTTGGTGGCTTCAATAGGATCAGTCACACTGCTGAGTACTTCACCTCTGAAGGATGGTATGATGACCGGCCTCGATCATTCCTCGTGTATGCACCTTGTAGAACAGCGGTGGTGTATGCCCTTGCAGATGCTGAATCAGAGCCAGTTGAACTGTCAGTTGGAATTGAATCAGAGCCAGTTGAACTGTCAGTTGGAGTTGAATCAGAGCCAGTTCAACAGTCAGTTGAAGTTGAACCCTGA 2667 0.4218 MVYTISGIRFPVIPSLQNSTTIRGVADRRPSSSSHSFLLNKKNYSSLSRTSLYAKFSRDSETKSSTIAESDKVLIPEDQDDSASVTDQLENPDITTEDAQNLEDLTMKDGNKYNLDEAASSFREVGDAKGSVVSSSLVDVNTDAQVKKTSVHSDKKVKIDKPKIIPPPGTGQKIYEIDPFLEAHRQHLDFRYGQYKKIREEIDKYEGGLDAFSRGYEKLGFTRSATGITYREWAPGAKSAALVGDFNNWNPNADVMTRDDFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSISAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFKHPQPKRPDSIRIYEAHIGMSSPEPKINTYANFRDDVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEDLKSLIDRAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDGHYFHPGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYNEYFGFATDVEAVVYLMLVNDLIHGLFPEAVSIGEDVSGMPTFCLPTQDGGIGFNYRLHMAVADKWIELLKKKDEDWRMGDIVHTLTNRRWLENCVVYAESHDQALVGDKTLAFWLMDKDMYDFMALDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPNGKVVPGNNNSFDKCRRRFDLGDADYLRYRGMQEFDRAMQHLEERYHFMISQHQYISRKNEGDKVIIFERDNLVFVFNFHWTNSYSDYKVGCLKPGKYKIVLDSDDALFGGFNRISHTAEYFTSEGWYDDRPRSFLVYAPCRTAVVYALADAESEPVELSVGIESEPVELSVGVESEPVQQSVEVEP* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0763 888 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 218 300 IPR004193 GO:0004553|GO:0005975
Tpr6g0763 888 Gene3D Glycosidases 178 747 - -
Tpr6g0763 888 SUPERFAMILY E set domains 212 321 IPR014756 -
Tpr6g0763 888 Pfam Alpha amylase, catalytic domain 367 438 IPR006047 GO:0005975
Tpr6g0763 888 Gene3D Immunoglobulins 214 326 IPR013783 -
Tpr6g0763 888 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 5 859 IPR037439 GO:0003844|GO:0005978
Tpr6g0763 888 Gene3D - 752 859 IPR013780 -
Tpr6g0763 888 Pfam Alpha amylase, C-terminal all-beta domain 756 849 IPR006048 GO:0003824|GO:0005975|GO:0043169
Tpr6g0763 888 SUPERFAMILY (Trans)glycosidases 330 748 IPR017853 -
Tpr6g0763 888 CDD E_set_GBE_euk_N 226 319 - -
Tpr6g0763 888 SMART aamy 357 717 IPR006047 GO:0005975
Tpr6g0763 888 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 5 859 - -
Tpr6g0763 888 CDD AmyAc_bac_euk_BE 323 738 - -
Tpr6g0763 888 SUPERFAMILY Glycosyl hydrolase domain 753 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0763 Tpr-Chr6 6331278 6348835 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0763 32 852 Glycoside Hydrolase AT5G03650 74.272 0.0 1289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0763 K00700 - gmx:100785968 1518.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0763 6 6331278 6348835 Tpr6g0763 6 6331278 6348835 ECH