Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0762 ATGACCCTACTTTTGGGTCCTCCAGGTTCAGGGAAAACTACATTGCTTAAGACACTTGCAGAGTCTCTTGATCGGAATTTAAGGATTAGAGGAAGAATTACTTATTGTGGACATGAACTAAATGAATTTGTTGCTAGAAGAACATGTGCTTATATTGGTGAACATGACCTTCATTATGGAGAAATGACTGTGAGAGAGACATTAGATTTTTCAGGACGTTGTTTAGGTGTTGGAACAAGGTATCAAATGTTAGAGGAACTTTTAAGAAGGGAAATAGGAGCAGGAATTAAGCCAGACCCTGAGATTGATGCATTCATGAAGGCTACATCACTATCAGGCCAAAAAGCCAGTTTGATAACAGATTATGTTCTCAAGTTGCTTGGATTGGATATTTGTGCTGACACCAAAATTGGTGATGACATGACAAGGGGTATCTCTGGAGGACAAAAGAAGCGAGTCACAACAGGGGAGATGCTAGCTGGACCGGCAAAAACACTTTTCATGGATGAAATATCAACAGGATTAGATAGTTCAACAACTTTTCAAATAACCAAGTTCATGAGACAAATGGTTCACATATTAGATGTAACAATGGTGATTTCTCTTCTACAACCAGCACCAGAGACATTTGAACTCTTTGATGACATTATACTACTTTCAGAAGGTCAAATTGTATACCAAGGACCGCGTGAAAACGTGTTAGAGTTTTTCGAAACCATCGGTTTCAAATGTCCTTCAAGAAAAGGAGTAGCAGATTTTTTACAAGAAGTGACATCGAAAAAAGACCAACAACAATATTGGTTCAGAAACGATAAACCTTACAGATATGTTTCAGTTTCTGAATTTGTTGATTGTTTTAATTCATTTCATATCGGAGAGAAACTTGTGGAAGAACTTAAGGTTCCTTATGATAAAAGAAAAACTCACCCAGCTGCATTAGTGAAAGAAAAGTTTGGAATATCAAATTGGGAACTATTGAAGGCATGTTTATCAAGAGAATGGTTACTTATGAAACGCGGAAATGCTGTTTTTGTATTCAGAAATATACAATTAGCAATGATGGCGATTTTCCTAGCTACCTTGTTCCCTAGAACTATCATGCCTTTTGGAAGTGTTGAAGATGGACAAAAATACTTTGGAGCATTGTTTTTTACTATGTCGACTATGATGTTTCATGGTGGAGCTGAACAATCCTTGCTTGTTGACAGGCTTCCTGTCTTTTACAAACAAAGGGATTTCATGTTCTTTCCTGCATGGGCATTTGGGTTACCTATGTGGCTTCTTAGGATCCCCTTCTCATTTATTGAACCAATCATTTGGATTCTACCTACATACTATACAATTGGATTTGCTCCATCAGCTAGCAGATTATTTCGACATTATCTCGTATGTGTTAGCATTAACAACATGTCTCTTGGTCTATTTCGACTTGTTGGTGCTATTGGTAGAACACAAGTTCTTTCAAACATACTTGCTGGTTTGACCTATCAACTTGTATTTGTTCTTGGAGGATTCATCGTCGCTAAAAATGATATTAAGCCATGGATGTTATGGGGCTATTATGTTTCTCCTATGTCATATGGTCAAAATGCCATTGTAATAAATGAATTTTTAGATGAAAGATGGAGCAAACCAATTACAGACCCTATAGATAATGCAACTACTGTTGGGAAATTACTTCTTAAAGCTAGAGGATTTTATACACAAGACTATTGGTATTGGATATGCATTGGAGCCTTGTTTGGATTTTCTCTTCTTTTCAACTCTCTCTTCATTCTCGCAATAACTTATTTGAATCCTATAGATGGTTCAAATGCATTCGTCGAGGATGAAGGTGACGCGAAGAATGAGAATTTAACCCTTATACAAAATACAAATAAAGGTTCTGCAGAAAGTAGTTCTTTAAATGAAGAACGAAGAAAGGGAATGGTTTTACCGTTTCAACCTCTTTCACTTGCATTCAATCATCTGAACTACTGTGTAGATATGCCTGTTGAAATGAAGAGTAAGGGAATCAATGAAGATAGACTTCAACTACTACATGATGTTAGTGGTGCTTTCAGACCTGGAATATTGACAGCACTTATGGGTGTTAGTGGTGCCGGAAAGACAACCCTCATGGATGTATTAGCCGGAAGAAAAACAGGCGGATACATTGAAGGAAGTATTAACATTTCTGGTTATCCAAAAAATCAAACAACATTTGCTCGAGTTAGTGGTTATTGTGAGCAAAATGACATTCATTCTCCCTATGTTACTGTCTATGAATCTTTACTATTTTCTGCATGGCTTCGTCTTCCTTCAGACATTGACACAAAAACAAGAAAGAGGTTTGTTGAACAAGTCATGGAATTAGTTGAGCTTACACCAATCAAAGATGCACTTGTAGGCTTTCCAAGAGTGAATGGTTTATCAACAGAACAAAGAAAAAGGCTTACTATTGCTGTGGAATTGGTTTCTAACCCTTCCATCATCTTCATGGATGAACCAACATCAGGCCTTGATGCTAGAGCCGCTGCTATCGTCATGCGAACTGTTAGAAACACAGTAGACACAGGGAGAACTGTTGTGTGCACAATTCACCAACCAAGCATTGACATTTTTGAAGCTTTTGATGAGCTATTGTTGATGAAAAGGGGAGGACAAATTATTTATGCAGGACCTCTTGGTCATCAATCACATAAGCTTATAGAATATTTTGAAGCTATTGAGGGGGTTCCAAAAATCAATGTCGGATATAATCCTGCCGCATGGATGCTTGAGATCAGTAGTGCTTCAACTGAGGCCCAACTTGGTGTAGATTTTGCAGAGATTTATGCCAATTCTACACTTTACCGAAGGAACCAAGAGCTTATCGAAGAAATCAGTACTCCTACACCAGGTTCCACGGACTTATTCTTCCCAACCAAATATTCTCAACCATTTTTTGTGCAGTTCAAAGCTTGTTTCTGGAAACAATATTGGTCGTATTGGAGAAATCCTCCATATAATTGTGCTCGATTCATTTTCACAATATCAATCGGATTATTGTTCGGACTCATTTTTTGGGATAAAGGCCAACATTTCCAAAAACAACAAGATTTATTTAATCTTATGGGAGCTATGTTTGCTGTTGTAATGATCCTCGGAACCATTAATATTATGGGAGTGCAACCAGTTGTTGACATGGAACGAATTGTCTTATATCGCGAAAAAGCTGCAAGAATGTATTCTGAATTGGCTTATGCATTTGGTCAGGTGGCAATAGAGATAATTTACAACTTAATTCAAGCAGCCATATACACTACTCTTATTTATTCCATGATTGGGTTTGAATGGAATGCAGCAAGATTCTTCCTTTTGTACTATTTTTTGTCAATGTGTTTAATCTTCCTCACCTTGTATGGGATGATGTCAGTTGCTTTAACCCCAAGTTACCAACTTGCTTCTATTTTTAGTCCTGTCTTCACCAGTATATGGAACTTGTTTTCTGGCTTTGTCATTCCTAGGACGCAAATTCCTAAATGGTGGAGATGGTTCTATTGGGCTTCTCCCAATGCTTGGGCAATCTATGGCATAGTTACATCTCAATTAGGTGACAAAAATGATCAAATTGAAGTCCCAGGAGTTGGATACATGAGTGTTAAGGAATTTCTCAAACAAACTTATGGTTTTGAATATGACTTTTTACCTTGGGTTGCTATTGCTCATGTGGGTTGGGTTCTTCTTTTCTTGTTTTTTTTCGCATATGCCATGAAATTCCTAAACTTTCAAAAAAGATAG 3762 0.3735 MTLLLGPPGSGKTTLLKTLAESLDRNLRIRGRITYCGHELNEFVARRTCAYIGEHDLHYGEMTVRETLDFSGRCLGVGTRYQMLEELLRREIGAGIKPDPEIDAFMKATSLSGQKASLITDYVLKLLGLDICADTKIGDDMTRGISGGQKKRVTTGEMLAGPAKTLFMDEISTGLDSSTTFQITKFMRQMVHILDVTMVISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLEFFETIGFKCPSRKGVADFLQEVTSKKDQQQYWFRNDKPYRYVSVSEFVDCFNSFHIGEKLVEELKVPYDKRKTHPAALVKEKFGISNWELLKACLSREWLLMKRGNAVFVFRNIQLAMMAIFLATLFPRTIMPFGSVEDGQKYFGALFFTMSTMMFHGGAEQSLLVDRLPVFYKQRDFMFFPAWAFGLPMWLLRIPFSFIEPIIWILPTYYTIGFAPSASRLFRHYLVCVSINNMSLGLFRLVGAIGRTQVLSNILAGLTYQLVFVLGGFIVAKNDIKPWMLWGYYVSPMSYGQNAIVINEFLDERWSKPITDPIDNATTVGKLLLKARGFYTQDYWYWICIGALFGFSLLFNSLFILAITYLNPIDGSNAFVEDEGDAKNENLTLIQNTNKGSAESSSLNEERRKGMVLPFQPLSLAFNHLNYCVDMPVEMKSKGINEDRLQLLHDVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKNQTTFARVSGYCEQNDIHSPYVTVYESLLFSAWLRLPSDIDTKTRKRFVEQVMELVELTPIKDALVGFPRVNGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQIIYAGPLGHQSHKLIEYFEAIEGVPKINVGYNPAAWMLEISSASTEAQLGVDFAEIYANSTLYRRNQELIEEISTPTPGSTDLFFPTKYSQPFFVQFKACFWKQYWSYWRNPPYNCARFIFTISIGLLFGLIFWDKGQHFQKQQDLFNLMGAMFAVVMILGTINIMGVQPVVDMERIVLYREKAARMYSELAYAFGQVAIEIIYNLIQAAIYTTLIYSMIGFEWNAARFFLLYYFLSMCLIFLTLYGMMSVALTPSYQLASIFSPVFTSIWNLFSGFVIPRTQIPKWWRWFYWASPNAWAIYGIVTSQLGDKNDQIEVPGVGYMSVKEFLKQTYGFEYDFLPWVAIAHVGWVLLFLFFFAYAMKFLNFQKR* 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0762 1253 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 1 1253 - -
Tpr6g0762 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 245 IPR027417 -
Tpr6g0762 1253 Pfam ABC-2 type transporter 978 1190 IPR013525 GO:0016020|GO:0140359
Tpr6g0762 1253 Pfam ABC-2 type transporter 325 537 IPR013525 GO:0016020|GO:0140359
Tpr6g0762 1253 Pfam Plant PDR ABC transporter associated 542 608 IPR013581 -
Tpr6g0762 1253 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1253 - -
Tpr6g0762 1253 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 665 905 IPR003439 GO:0005524
Tpr6g0762 1253 Pfam ABC-2 type transporter 861 904 IPR043926 GO:0140359
Tpr6g0762 1253 Pfam ABC-2 type transporter 204 257 IPR043926 GO:0140359
Tpr6g0762 1253 Pfam ABC transporter 680 832 IPR003439 GO:0005524
Tpr6g0762 1253 Pfam ABC transporter 2 171 IPR003439 GO:0005524
Tpr6g0762 1253 Gene3D - 1 279 IPR027417 -
Tpr6g0762 1253 SMART AAA_5 689 881 IPR003593 -
Tpr6g0762 1253 SMART AAA_5 1 223 IPR003593 -
Tpr6g0762 1253 Gene3D - 665 901 IPR027417 -
Tpr6g0762 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 675 890 IPR027417 -
Tpr6g0762 1253 CDD ABCG_PDR_domain2 649 887 IPR034003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0762 Tpr-Chr6 6323832 6329763 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0762 K08711 - gmx:100790545 1931.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0762 6 6323832 6329763 Tpr6g0762 6 6323832 6329763 ECH