Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0761 ATGGCATCGGTATTGGCGGGGGATGAGGTGGCCATATCAACAAGCAGTCGTCGGAGTTGGACATCAACCAGTTTTAGAGACGTCTGGACGGCGACAGCTGCGGCCATTCCCGATGTATTCGAGCGGAGTGATCGGCACACACAAGAAGATGATGAGTACCACCTTACTTGGGCAGCCATTGAACGGTTGCCTACTTTTGAGCGTATGAGAAAAGGTGTAATGAAACATGTTGCTGAAAATGGAAAAGTTGTGCATGATGAAGTTGATGTTGCTAAACTTGGTTTACATGATAAAAAGATTTTGTTGGATAGTATACTTAAGATTGTCGAAGAAGACAATGAGAAGTTTCTTAGAAAACTTAGAGACAGACAAGACAGGGTAGGGATTGAGATTCCAAAAATTGAAGTTCGTTATGAGAATTTATCTGTGGAGGGAGATGTGTATGTTGGAAGCAGAGCACTTCCAACACTGCTTAATGTTACCATCAATACTTTGGAGAGTGTTTTGGGATTGTTTCATCTTGCACCATCCAAGAAGAGAGAGATTCAAATTCTCAAACATGTTAGTGGAATTGTGAAACCATCAAGGATGACACTGCTTCTAGGTCCTCCAGGTTCCGGAAAAACAACATTGCTTTTAGCTTTAGCAGGAAAACTTGATCATAATTTAAGGGCTTCTGGGAAAATCACTTATTGTGGTCATGAGCTAAATGAATTTGTTGCTACGAAAACTTGTGCTTATATTAGTCAACATGACATTCATTATGGAGAAATTACAGTGAGAGAGACTTTGGATTTTTCATCGCGTTGTCTAGGTGTTGGTACTAGGTATGAATTGTTGATGGAACTCTCAAGAAGGGAGAGAGATGCAGGAATTAAACCAGATCCTGAGATTGATGCTTTCATGAAGGCTATAGCATTATCAGGCCAAAAAAGCAGTTTTGTAACTGATTATGTTCTCAAGATGCTTGGATTGGATATTTGTGCTGACATTATGGTTGGCGACGAAATGAGAAGGGGAATCTCAGGAGGACAAAAGAAGCGAGTAACGACAGGGGAGATGCTGGTAGGACCAGCAAAAGCACTTTTCATGGATGAAATATCCACAGGATTGGATAGTTCAACCACTTTTCAAATATGCAAGTTCATGAGACAAATGGTTCATATAATGGATGTAACCGTCGTCATTTCACTTTTACAGCCAGCACCAGAGACATTTGAACTCTTTGACGACATTATTCTACTTTCAGAAGGACAAATTGTATACCAAGGACCACGCGAAAACGTGCTAGAGTTCTTCGAATACACAGGTTTTAAATGTCCAGATAGAAAAGGTGTTGCTGATTTTTTACAAGAAGTAACATCCAAGAAAGATCAACAACAATACTGGTTTAGAAAAGATGAACCTTATAGATATGTTTCAGTTTCTGAATTTGTTGATTACTTTAATTCATTTCATATCGGAGAGGAAATTGCGGACGAGCTTAAGGTTCCTTATAATAAGAGTCAAACTCATCCAGCTGCATTAGTGAAAGAAAAGTATGGTATATCAAATTGGGAACTATTTAAGGCATGCTTTTCAAAAGAATGGCTTCTTATGAAGAGGAATGCTTTTATTTATGTATTCAAAACAACACAGATAACAATCATGTCTATTATTACTTTTACTGTGTTCTTTAGAACAAAAATGTCGGTTGGTACCGTTCAAGATGGACAAAAATTCCATGGAGCATTATTCTTTACACTGATAAATGTGATGTTTAATGGGATGGCAGAACTATCCATGACAGTTACTAGGCTTCCTGTTTTCTACAAACAAAGGGATTTCAAGTTTTATCCTGCATGGGCGTTCGCGTTACCGATATGGATTCTTAGGATCCCTCTTTCCTTTTTGGAATCATTGATATGGATTGTTCTTACATATTTTACCATTGGTTTTGCTCCTTCTGCTAGCAGATTTTTTCGACAATTCTTGGCATTATTTGGCATTCATCAGATGGCTCTTTCTTTATTTCGGTTCGTCGCTGCAATTGGTAGATCACTAGTTATTGCTAATTCATTAGGTACCTTGACCTTGCTAGTGGTATTTACGCTAGGAGGTTTCATTATTGCCAAAGACGACATCAAGCCATGGATGATATGGGGCTACTATATATCTCCTATAATGTATGGCCAGAATGCCATAGCAATTACTGAATTTTTAGACAAAAGATGGAATATACCAAATACAGATACAAGATTTGATGCACCAACAATAGGAAAAGTACTTCTGAAATCGAGAGGCTTGTATACAGAAGATTATTGGTATTGGATCTGCCTTGGAGCCTTGGCTGGATTTTCTCTTCTCTTCAACCTTCTCTTCATTCTTGCACTAACTTACTTGAATCCTTTAGTTGATTCAAAAGCAGTCACTGCGGATGAAGATGACAAGAAGAATGGAAATCCATCCTCTAGACACCTTCCTATTGAAGGTACCAACATATCAATGAGAAATTCTTCAGAATTTACTAGTCCATCGAACCATGAACCGAGAAGAGGAATGGTTCTACCGTTTCAACCTCTTTCAATGGCATTCAATCATATTAGCTACTTTGTAGACATGCCAGCAGAAATGAAGAGTCAAGGAATCAACAAGGATAGACTTCAACTGCTACAAAATGTTAGTGGTGCTTTTAGACCAGGCATATTAACAGCACTTGTAGGTGTTAGTGGTGCTGGAAAGACAACACTCATGGATGTATTAGCTGGAAGAAAAACAGGTGGATACATCGAAGGAAATATCAGCATATCAGGTTATCAAAAGAACCAAGCAACATTTGCTCGAATAAGTGGTTACTGCGAACAGAACGACATTCATTCTCCGCATGTTACTGTCTATGAATCACTATTGTTTTCAGCATGGCTTCGTCTTCCTTCAGATGTAAAGACGCAAACTCTAAAGATGTTTGTTGAAGAAGTTATGGAGTTGGTCGAGCTTAAACCACTTAGAGATGCTCTTGTCGGCCTTCCAGGTGTGGATGGTTTATCAACAGAACAAAGGAAAAGGCTTACGATCGCTGTGGAACTGGTTGCCAACCCTTCAATCATCTTCATGGATGAACCAACTTCTGGCCTTGATGCTAGAGCTGCGGCTATTGTTATGCGAACCGTGAGAAACACAGTAGATACGGGGAGAACTGTTGTTTGCACAATTCATCAACCAAGCATAGACATTTTTGAAGCTTTTGATGAGCTATTCTTGATGAAAAGAGGAGGACAGGTTATCTATGCCGGACCTCTCGGTCGCCACTCACATAAGCTTGTAGAATATTTTGAAGCTATCCCGGGAGTTCAAAAAATCAAGGATGGTTATAATCCGGCCACATGGATGCTTGAAATCAGCTCTACTTCAGTTGAGGCTCAATTAAATGTCGATTTTGCAGAGATTTATGCCAACTCTACCCTTTACCAGAGGAATCAAGAACTTATTAAGGAGCTGAGTACTCCAGCACCGGATTCTAAGGACTTGTACTTCCCAACCAAATATTCGCAATCATTTTTTGTTCAATGCAAAGCTAACTTCTGGAAACAACATCTGTCCTATTGGAGACATTCTCAATATAATGCCGTCCGATTCTTCATGACCATAGTCATTGGAGTATTGTTTGGTCTAATATTTTGGAAGCAAGCAAAAAATACCAAAACACAACAAGGTTTACTGAATCTTTTGGGAGCCATGTACTCCTCGGTGCTCTTTCTCGGTGCAACAAATTGTATGTCTGTGCAACCAGTTGTTGCCATTGCAAGAACGGTCTTCTATCGAGAAAGAGCAGCAGGGATGTATTCTGCATTACCCTATGCATTTGGTCAGGTGGCAGTTGAGACAATATATAATGCAATTCAAACAGCCATTTACTCACTAATCCTTTATTCCATGATGGGATTTGAATGGAAGGCAACAAACTTCTTATGGTTCTATTACTACATACTAATGAGTTTTATATACTTCACATTGTATGGAATGATGCTTGTTGCGCTAACACCAGGTCACCATGTTGCTGGCATTTGTATGTCCTTTTTTCTGAGTTTTTGGAACTTGTTCTCCGGCTTCATCATTCCTAGGACGCAAATTCCTATATGGTGGAGATGGTACTATTGGGCTTCACCTGTTGCATGGACATTATATGGCCTAATAACCTCACAACTAGGGGACAAGAAAACAGAAATAGTGATACCAGGAGATGGAAGCATGGAACTTAAGGAATTCTTGAAACATAATTGGGGTTATGATCATGATTTCCTTCCAGAAGTTGCTGTTGCTCATATAGGATGGGTTCTTCTCTTTGCATTTGTGTTTGCTTTTGGCATCAAATTCTTGAACTTCCAGAAAAGATAG 4374 0.393 MASVLAGDEVAISTSSRRSWTSTSFRDVWTATAAAIPDVFERSDRHTQEDDEYHLTWAAIERLPTFERMRKGVMKHVAENGKVVHDEVDVAKLGLHDKKILLDSILKIVEEDNEKFLRKLRDRQDRVGIEIPKIEVRYENLSVEGDVYVGSRALPTLLNVTINTLESVLGLFHLAPSKKREIQILKHVSGIVKPSRMTLLLGPPGSGKTTLLLALAGKLDHNLRASGKITYCGHELNEFVATKTCAYISQHDIHYGEITVRETLDFSSRCLGVGTRYELLMELSRRERDAGIKPDPEIDAFMKAIALSGQKSSFVTDYVLKMLGLDICADIMVGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHIMDVTVVISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLEFFEYTGFKCPDRKGVADFLQEVTSKKDQQQYWFRKDEPYRYVSVSEFVDYFNSFHIGEEIADELKVPYNKSQTHPAALVKEKYGISNWELFKACFSKEWLLMKRNAFIYVFKTTQITIMSIITFTVFFRTKMSVGTVQDGQKFHGALFFTLINVMFNGMAELSMTVTRLPVFYKQRDFKFYPAWAFALPIWILRIPLSFLESLIWIVLTYFTIGFAPSASRFFRQFLALFGIHQMALSLFRFVAAIGRSLVIANSLGTLTLLVVFTLGGFIIAKDDIKPWMIWGYYISPIMYGQNAIAITEFLDKRWNIPNTDTRFDAPTIGKVLLKSRGLYTEDYWYWICLGALAGFSLLFNLLFILALTYLNPLVDSKAVTADEDDKKNGNPSSRHLPIEGTNISMRNSSEFTSPSNHEPRRGMVLPFQPLSMAFNHISYFVDMPAEMKSQGINKDRLQLLQNVSGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGNISISGYQKNQATFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVKTQTLKMFVEEVMELVELKPLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRHSHKLVEYFEAIPGVQKIKDGYNPATWMLEISSTSVEAQLNVDFAEIYANSTLYQRNQELIKELSTPAPDSKDLYFPTKYSQSFFVQCKANFWKQHLSYWRHSQYNAVRFFMTIVIGVLFGLIFWKQAKNTKTQQGLLNLLGAMYSSVLFLGATNCMSVQPVVAIARTVFYRERAAGMYSALPYAFGQVAVETIYNAIQTAIYSLILYSMMGFEWKATNFLWFYYYILMSFIYFTLYGMMLVALTPGHHVAGICMSFFLSFWNLFSGFIIPRTQIPIWWRWYYWASPVAWTLYGLITSQLGDKKTEIVIPGDGSMELKEFLKHNWGYDHDFLPEVAVAHIGWVLLFAFVFAFGIKFLNFQKR* 1458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0761 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 865 1108 IPR003439 GO:0005524
Tpr6g0761 1457 Pfam ABC transporter 185 367 IPR003439 GO:0005524
Tpr6g0761 1457 Pfam ABC transporter 884 1036 IPR003439 GO:0005524
Tpr6g0761 1457 Gene3D - 171 476 IPR027417 -
Tpr6g0761 1457 Pfam ABC-2 type transporter 1065 1135 IPR043926 GO:0140359
Tpr6g0761 1457 Pfam ABC-2 type transporter 400 453 IPR043926 GO:0140359
Tpr6g0761 1457 Pfam ABC-transporter N-terminal 110 160 IPR029481 -
Tpr6g0761 1457 CDD ABCG_PDR_domain2 853 1091 IPR034003 -
Tpr6g0761 1457 CDD ABCG_PDR_domain1 174 424 IPR034001 -
Tpr6g0761 1457 PANTHER ATP-BINDING CASSETTE TRANSPORTER 20 1457 - -
Tpr6g0761 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 879 1093 IPR027417 -
Tpr6g0761 1457 Pfam Plant PDR ABC transporter associated 738 803 IPR013581 -
Tpr6g0761 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 169 442 IPR003439 GO:0005524
Tpr6g0761 1457 Pfam ABC-2 type transporter 521 733 IPR013525 GO:0016020|GO:0140359
Tpr6g0761 1457 Pfam ABC-2 type transporter 1182 1394 IPR013525 GO:0016020|GO:0140359
Tpr6g0761 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 442 IPR027417 -
Tpr6g0761 1457 Gene3D - 870 1105 IPR027417 -
Tpr6g0761 1457 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 20 1457 - -
Tpr6g0761 1457 SMART AAA_5 194 419 IPR003593 -
Tpr6g0761 1457 SMART AAA_5 893 1085 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0761 Tpr-Chr6 6311820 6319791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0761 K08711 - gmx:100786482 2444.85