Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0755 ATGAGTACTCTAGTCAACAACGTTAACGGTTTCGTCAACGGTGTAGATGCAAACGCCGAGAAACTCATTATCGATACTGACCCTGGGATCGATGATAGTATGGCGATTTTAATGGCATTTCGTTGTCCTGAAGTGGAGGTGGTGGGATTGACAACTGTTTTTGGTAATGCTGCTACTGAAGATTCTACACGTAATGCTTTGAATTTGTGTGAGATCGCAGGCCGTGGAAGTGTTCCTGTTGCAGAAGGAAGTACTGAGCCATTGAAGGGTGGAAGGCCTCGAGTGGCTGATTTTGTTCATGGTAAAGATGGATTAGGGAATATATTCCTACCTGATCCTAAAGCTAGTAAAATTGACAAAAGTGCTAGTGAGTTTTTAGTGGAGAAGGTTTCTGAATATCCTGGTGAAATAACTGTTCTAGCACTTGGACCACTTACTAACATAGCTCTAGCAATCAAAAGAGATTCTTCTTTTGCAAGCAAGGTGAAGAAAATAGTTGTACTTGGTGGTTCATTCTTTGCCTTGGGGAATGTCAATCCAGCTGCAGAAGCAAATATATATGGAGACCCAGAAGCAGCAGATACTGTGTTTACCTCTGGGGCAGATGTTGTTGTTGTTGGAATAAACATCACAACCCAAGTGCAATTGACAGATGCTGACCTCCTTGAACTGAAGGAATCAAAAGGAAAGCATGTAGCTCTTTTAAGTGAAATGTGCAAATTCTACAGAGATTGGCATGTAAAATCTGACGGCGTCTATGGAATTTTCCTCCACGACCCTGTTAGTTTCGTGGCAGTTGTGCGTCCAGATCTTTTCACATACAAGAAGGGGGTAGTGAGGGTAGAGACACAAGGTGTTTGTGTTGGACATACACTTCTAGACCAAGGACTGAAAAGATGGAATACAAGCAACCCATGGACAGGTTATTCTCCTATTTCAGTTGCTTGGACTGTGAATGTTGAGGGAGTTCTTAGTTACATTAAGGAGCTGTTGATGAAACCCTGA 1005 0.4239 MSTLVNNVNGFVNGVDANAEKLIIDTDPGIDDSMAILMAFRCPEVEVVGLTTVFGNAATEDSTRNALNLCEIAGRGSVPVAEGSTEPLKGGRPRVADFVHGKDGLGNIFLPDPKASKIDKSASEFLVEKVSEYPGEITVLALGPLTNIALAIKRDSSFASKVKKIVVLGGSFFALGNVNPAAEANIYGDPEAADTVFTSGADVVVVGINITTQVQLTDADLLELKESKGKHVALLSEMCKFYRDWHVKSDGVYGIFLHDPVSFVAVVRPDLFTYKKGVVRVETQGVCVGHTLLDQGLKRWNTSNPWTGYSPISVAWTVNVEGVLSYIKELLMKP* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0755 334 SUPERFAMILY Nucleoside hydrolase 21 331 IPR036452 GO:0016799
Tpr6g0755 334 CDD nuc_hydro_CaPnhB 21 331 - -
Tpr6g0755 334 Pfam Inosine-uridine preferring nucleoside hydrolase 22 323 IPR001910 GO:0016799
Tpr6g0755 334 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 15 334 IPR023186 -
Tpr6g0755 334 Gene3D - 11 334 IPR036452 GO:0016799
Tpr6g0755 334 PANTHER URIDINE NUCLEOSIDASE 1 15 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0755 Tpr-Chr6 6249180 6252669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0755 K01240 - gmx:100818908 556.984