Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0734 ATGAAGAAGCATTTACTAAAACCAATCACAAAACCACCACCACCATCACCACCACCACAAATCCTCAACCCACCACCACCACAACCAACCCCATCTCTCTTCCCTCCAACACTCTCACCCACCCAAAACTACACCCACTTCCTCCAATACCTCAACACTCATCTCACCCCACCACTCACTCCACAAACCCTCACTCATTTCCTCAAATCAAAGCTCCACCATCACCCATCATTCACCCACTACGATTTCCATCTCTTCACTTGGGCTTCAACTCTTGACACTTTCTCTCACAATCACACTTCCTATCAATGGATGACACGTACTCTCGCTCTCTCTCATCGTTTCTCTCTTCTCCGTACCCTCCTCACTTTCATTTCCTCAAACCCTTGTAATTGCTCCCAAGCCATTTTCTCTTGCCCTGAAACCGAACCCATTTTCAGGTTTGCTATTCAATCTTACTGTAAAGCTTCAAAATTTGATGATGCCCTTTTTGCATTTAACTCTATGCGGAGGTTAATCGATGGAAAACCGAGTGTTTCATTGTGTAATATTTTGATTCATGGGTTTGTTAAATCTGGTAGGTTTGATAGAGCTTATGAATTTTATAATCAGATGGTTAAGGATAGGATTAAGCCTGATGTTTTTACTTTTAATATTTTGATTAGTGGTTATTGTAGGAATTTTAAGTTTGCTTTTGCATTGGAGATGTTTGAGGAAATGCACAAAATGGGGTGTCATCCAAATGTTGTTACTTTTAATACTTTGATTAGAGGGTTGTTTAGGGAGCGTAGGATTGATGAAGGGATTGGGATGGTTTATGAGATGACTGAATTGGGGTGTCAACTTTCTGATGTCACTTGTGAGATTTTGGTAGATGGGCTTTGTAAGGAAGGTCGGGTTTTTCAGGCGTGCGATTTGTTGATGGAGTTATCTAATAGAGGGGTTTTGCCTAAAGGGTATGATTATTTTGTTTTGGTAGAAATTTTGTGCGGGAAAGGAGATGCTTTTAAAGCTTTGGAAGTTATTTATGAGCTATGGAGCAAAGGTTGTGTTCCTAGCTTGATTTCTTGTATTGTGATGATTGATGGTTTGAGAGGAGTGGGGAAGATTGAAGAGGTGATGAGATTTGTGGAAAAAATGGTTAAAGAGGAGGGTATGGTACTTGATGTTGTCACTTTCAATTCTGTTCTTCAAGATGTTTGCGATGCGAGAAGGACAGATGAGGCGAATAGGTTGAGATTACTTGCTTCGAGCAAGGGTTTGGAACCTGATGGCATGACTTATAAGATTCTGGTTTCCGGGTATAGAGGAGAGGGAAATCAAACGGAAGGTGAGTTAGTGGTAAATGAAATGTTGGATAGGGGGTTTATACCTGATCTTGCTTCATATAATAAGTTGATGGATGGACTGTCTAATTGTCAAAGCTCTAGGCGTTATCAAGTGAACAAATTTGGCAGCTGA 1461 0.4066 MKKHLLKPITKPPPPSPPPQILNPPPPQPTPSLFPPTLSPTQNYTHFLQYLNTHLTPPLTPQTLTHFLKSKLHHHPSFTHYDFHLFTWASTLDTFSHNHTSYQWMTRTLALSHRFSLLRTLLTFISSNPCNCSQAIFSCPETEPIFRFAIQSYCKASKFDDALFAFNSMRRLIDGKPSVSLCNILIHGFVKSGRFDRAYEFYNQMVKDRIKPDVFTFNILISGYCRNFKFAFALEMFEEMHKMGCHPNVVTFNTLIRGLFRERRIDEGIGMVYEMTELGCQLSDVTCEILVDGLCKEGRVFQACDLLMELSNRGVLPKGYDYFVLVEILCGKGDAFKALEVIYELWSKGCVPSLISCIVMIDGLRGVGKIEEVMRFVEKMVKEEGMVLDVVTFNSVLQDVCDARRTDEANRLRLLASSKGLEPDGMTYKILVSGYRGEGNQTEGELVVNEMLDRGFIPDLASYNKLMDGLSNCQSSRRYQVNKFGS* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0734 486 TIGRFAM PPR: pentatricopeptide repeat domain 181 214 IPR002885 -
Tpr6g0734 486 TIGRFAM PPR: pentatricopeptide repeat domain 250 283 IPR002885 -
Tpr6g0734 486 TIGRFAM PPR: pentatricopeptide repeat domain 427 459 IPR002885 -
Tpr6g0734 486 TIGRFAM PPR: pentatricopeptide repeat domain 285 317 IPR002885 -
Tpr6g0734 486 TIGRFAM PPR: pentatricopeptide repeat domain 215 249 IPR002885 -
Tpr6g0734 486 MobiDBLite consensus disorder prediction 1 25 - -
Tpr6g0734 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 248 282 IPR002885 -
Tpr6g0734 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 283 317 IPR002885 -
Tpr6g0734 486 Gene3D Tetratricopeptide repeat domain 141 265 IPR011990 GO:0005515
Tpr6g0734 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 424 458 IPR002885 -
Tpr6g0734 486 Pfam PPR repeat family 212 260 IPR002885 -
Tpr6g0734 486 PANTHER ATPASE EXPRESSION PROTEIN 3 11 475 - -
Tpr6g0734 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 213 247 IPR002885 -
Tpr6g0734 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 178 212 IPR002885 -
Tpr6g0734 486 Pfam Pentatricopeptide repeat domain 418 468 IPR002885 -
Tpr6g0734 486 PANTHER FERTILITY RESTORER HOMOLOGUE A-LIKE 11 475 - -
Tpr6g0734 486 MobiDBLite consensus disorder prediction 8 25 - -
Tpr6g0734 486 Gene3D Tetratricopeptide repeat domain 266 382 IPR011990 GO:0005515
Tpr6g0734 486 Gene3D Tetratricopeptide repeat domain 383 483 IPR011990 GO:0005515
Tpr6g0734 486 Pfam PPR repeat 285 315 IPR002885 -
Tpr6g0734 486 Pfam PPR repeat 358 383 IPR002885 -
Tpr6g0734 486 Pfam PPR repeat 150 171 IPR002885 -
Tpr6g0734 486 Pfam PPR repeat 182 209 IPR002885 -
Tpr6g0734 486 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 389 423 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0734 145 480 Miscellaneous Gene Families AT4G11690 28.402 3.19e-43 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0734 - - aprc:113860936 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0734 6 6090646 6094418 Tpr6g0734 6 6090646 6094418 ECH