Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0729 ATGTCGAAGAGAAGGAAAAGGAAGTCGAAACCGGCAAGTGATAGAATCACAGGCAATAGAAGAGCTGCTGCTGAGGTGAAAAGTGAAAATTTGAAGCAGCAAGCCTGGGCCGATCTCCCTGTTGAACTCTTAGAGTTGATCTTGTCTCGTTTGATTGTAGTGGATAATGTTCGTGCTTCTGTTGTTTGCAAGAGATGGCATTCAGTTGCCAGTTCTGTACGTGCAGCGGACCAATCACCTTGGCTTATGTATTTCCCAAAAAGTGATAACTGTTATGACTTCTATGACCCTGTGCAGCGTAAGACCTATTCCCTTGAGTTTCCAGAGTTGGATGAATGTCGTGTTTGCTATACAAAAGATGGTTGGTTATTGCTATGTCGGGAGCAGTGGGCCATATATCACCATTTTTCTCTCTTTAATCCCTTTACTAGGGAGCTGATCAAGCTGCCAAGATTTGAAAGGTCATACTACAATGCTGCCTTCTCTTGTGCTCCAACATCAGCTAAATGTGTTATCTTAACTGTTAAACACGTTAACCCTACTCTTGTAGCTATCAGCACATGTTATCCTGGGGCAAATGAATGGACAACTGTTAATTACCAACACCGCTCAGTTTTTGTCATTAGCATATGGGATAAGCTTGTCTTTTCTAATGGGTTATTTTATTGTCTAAGCCCCACTGGTTGGCTAGGGGTGTTTGACCCACTTGAACGTACTTGGAGTGTTCTGGAAATACCTCCACCCAAATGCCTAGTAGAGAATTTTATAACCAAAGACTGGCGGAAAGGGAAATTTATAACAGCACACGAAGGAAATATATTTGTAATTCATATATGTTGTGGTGAGGACCCAATTATTTTCAAGTTAGACCAGACACTAATGGAATGGAAAGAGGTGAAAACGCTTGGTGGAGTGACACTTTTTGCTAGTTTTTTGTCATCTCATTCCAGGACTTACATCACTGGTATAATGCGAAACAGTGTCTACTTCTCTAAAGTACGTTTCTATGGAAAGCGTTGCATATCATTCTCTCTTGATGAGCATAGATATTATCCCAATAAGCAGTGTCATGACTGGGTAGAACGGAATGCTTTTGATACCATCTGGATTGAACCACCTAAAGACTTTGCTGGCTGGATGTAA 1143 0.4129 MSKRRKRKSKPASDRITGNRRAAAEVKSENLKQQAWADLPVELLELILSRLIVVDNVRASVVCKRWHSVASSVRAADQSPWLMYFPKSDNCYDFYDPVQRKTYSLEFPELDECRVCYTKDGWLLLCREQWAIYHHFSLFNPFTRELIKLPRFERSYYNAAFSCAPTSAKCVILTVKHVNPTLVAISTCYPGANEWTTVNYQHRSVFVISIWDKLVFSNGLFYCLSPTGWLGVFDPLERTWSVLEIPPPKCLVENFITKDWRKGKFITAHEGNIFVIHICCGEDPIIFKLDQTLMEWKEVKTLGGVTLFASFLSSHSRTYITGIMRNSVYFSKVRFYGKRCISFSLDEHRYYPNKQCHDWVERNAFDTIWIEPPKDFAGWM* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0729 380 SUPERFAMILY F-box domain 30 124 IPR036047 GO:0005515
Tpr6g0729 380 ProSiteProfiles F-box domain profile. 33 84 IPR001810 GO:0005515
Tpr6g0729 380 Pfam F-box-like 36 71 IPR001810 GO:0005515
Tpr6g0729 380 PANTHER OS09G0392200 PROTEIN 4 376 IPR044619 -
Tpr6g0729 380 Gene3D - 28 81 - -
Tpr6g0729 380 PANTHER OS09G0392200 PROTEIN 4 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0729 Tpr-Chr6 6031859 6035780 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0729 - - gmx:100796538 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0729 6 6031859 6035780 Tpr6g0729 6 6031859 6035780 ECH