Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0722 ATGACGGAAGTTCTTCAATTCCCTTCACCTTCAAGCTGTTCATCTACTCTCAATGATTCATCTCACCAAACTTCTCTTATTAGTCTCAATCCCAATCATGATCTTTTTCAGATTCAACAACAAGAAGAAGAAGAACAAGAACAAGAAGAAAAAGAACAAGAAGAAAAAGATCAACTTTCTATTTTGACACTTTTGATTGCTACTTTTAGAAAATCTTTGATTGGTTGTAGCAGCACTGGTGAAATTTCATCTTCTTCAATGGAAATTGGTTGGCCTTCTAATGTTAGACATGTTGCTCATGTTACTTTTGATCGTTTTCATGGTTTTCTTGGTTTACCTGTTGAATTTGAACCTGAAGTTCCAACTAGACCTCCAAGTGCTAGCACAAGTGTTTTTGGTGTTTCAACAGAATCTATGCAGCTTTCTTTTGACGCCAGAGGAAATAGTGTACCTACAATACTGCTGTTAATGCAAAGACATCTCTACGCACTAGGAGGCCTGCAGTCTGAAGGAATCTTCAGAATTAATGCTGAAAATAGTCAAGAGGAGTTTGTGAGGGCACAACTGAACAGAGGAGTTGTACCGAATGGCATTGACGTGCACTGCTTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTTCCAACCGGGATATTGGACCCTCTTGATCCGGAGCAGGTGATGCAGTCCCAATCAGAAGAAGAATGTGCTCAGCTTGTGAGCCTTCTTCCTCCAACAGAAGCTGCCCTCCTAGATTGGGCAATTAACCTAATGGCAGACGTTGCTCAGCTGGAACATTTGAACAAGATGAATGCACGTAATATCGCAATGGTTTTTGCACCAAACATGACTAACATGGTAGATCCTTTGACTGCTCTGATGTACGCTGTACAAGTCATGAATTTCCTCAAGACTCTAGTAGTGATGACACTGAAAGAAAGAGAGGAGTCTATCACAAAATCAAACCCTATCTCAAACCTAAATTCTTTTGATGATGACGCGCATCAGAGCGATTCACAAGTGCTTTTCAAGGATGACAGTGAATACGGAAATGATTGTAGCGACGATGACACTGTTTTTGTCACTGCCGAACCTTCGCAACAAAGCCCTACTTATCTTTTTAAAGATGACTGTGAAACTGAATCCGAAACTCTGCCAACATCTACAGAAAATTTTATTTCAAGTGGAAATAGGTTGCTGGTTGACAGTTGTCCGTGCAGCGTTGTCTCTCAAATTTGCTCTCTGGCAATTGCGGATCAAACAAAAAATTGCAACAGCAAAAGCCTTCAGTTGAATACTTCTGATACAGCAGGACCAGTGGAGAAGAACAGGGGAATTGCGCTTATTGGACGAATAAATTCAAGATCTGAGTGGGCTGAAGCTTGGCGTTGA 1392 0.4102 MTEVLQFPSPSSCSSTLNDSSHQTSLISLNPNHDLFQIQQQEEEEQEQEEKEQEEKDQLSILTLLIATFRKSLIGCSSTGEISSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPTRPPSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYALGGLQSEGIFRINAENSQEEFVRAQLNRGVVPNGIDVHCLAGLIKAWFRELPTGILDPLDPEQVMQSQSEEECAQLVSLLPPTEAALLDWAINLMADVAQLEHLNKMNARNIAMVFAPNMTNMVDPLTALMYAVQVMNFLKTLVVMTLKEREESITKSNPISNLNSFDDDAHQSDSQVLFKDDSEYGNDCSDDDTVFVTAEPSQQSPTYLFKDDCETESETLPTSTENFISSGNRLLVDSCPCSVVSQICSLAIADQTKNCNSKSLQLNTSDTAGPVEKNRGIALIGRINSRSEWAEAWR* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0722 463 CDD RhoGAP 151 303 - -
Tpr6g0722 463 Pfam RhoGAP domain 151 284 IPR000198 GO:0007165
Tpr6g0722 463 SUPERFAMILY GTPase activation domain, GAP 128 308 IPR008936 GO:0007165
Tpr6g0722 463 PANTHER MKIAA1688 PROTEIN 1 463 IPR044785 GO:0005096
Tpr6g0722 463 CDD CRIB 87 127 - -
Tpr6g0722 463 SMART PBD_5 89 123 IPR000095 -
Tpr6g0722 463 Coils Coil 35 62 - -
Tpr6g0722 463 MobiDBLite consensus disorder prediction 1 24 - -
Tpr6g0722 463 ProSiteProfiles Rho GTPase-activating proteins domain profile. 134 319 IPR000198 GO:0007165
Tpr6g0722 463 SMART RhoGAP_3 148 311 IPR000198 GO:0007165
Tpr6g0722 463 ProSiteProfiles CRIB domain profile. 89 102 IPR000095 -
Tpr6g0722 463 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 1 463 - -
Tpr6g0722 463 Gene3D Rho GTPase activation protein 118 323 IPR008936 GO:0007165
Tpr6g0722 463 Pfam P21-Rho-binding domain 88 115 IPR000095 -
Tpr6g0722 463 Gene3D CRIB domain 83 117 IPR036936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0722 Tpr-Chr6 5992645 5997685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0722 - - gmx:121172725 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0722 6 5992645 5997685 Tpr6g0722 6 5992645 5997685 ECH