Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0721 ATGAGCAGGTCAGGCCAACCACCAGATTTGAAGAAGTACATGGATAAACAGCTTCAAATCAAGCTGAATGCCAATCGTATGATTGTTGGTACTCTTCGTGGCTTCGACCAGTTTATGAATTTGGTTGTTGACAATACTGTGGAGGTCAATGGCAATGAGAAAAATGACATAGGGATGGTGGTAATCAGAGGAAATAGTGTGGTCACAGTAGAGGCACTTGAACCAGTGAATAGGACCTCCTGA 243 0.4321 MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVNRTS* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0721 80 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 1 79 IPR044641 -
Tpr6g0721 80 SMART Sm3 8 72 IPR001163 -
Tpr6g0721 80 SUPERFAMILY Sm-like ribonucleoproteins 9 76 IPR010920 -
Tpr6g0721 80 Pfam LSM domain 9 71 IPR001163 -
Tpr6g0721 80 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Tpr6g0721 80 Gene3D - 1 76 - -
Tpr6g0721 80 PIRSF Lsm7 5 79 - -
Tpr6g0721 80 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0721 Tpr-Chr6 5985182 5987203 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0721 K11099 - gmx:100305530 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0721 6 5985182 5987203 Tpr6g0721 6 5985182 5987203 ECH