Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0718 ATGTATTACAATGGATACTATCACCTATTCTACCAATACAATCCAAAAGGATCTGTGTGGGGAAACATTGTATGGGCTCATTCAGTATCAAAGGATCTTATAAACTGGGATGCACTTGAACCTGCTATTTATCCATCCAAACCCTTTGACAAATATGGATGTTGGTCCGGGTCGGCCACCATAGTTCCGGATAAGGGACCCATTATCCTTTACACCGGAATTATTGACGATAAAATGACTCAAGTCCAATGTTATGCTATACCCGAAGATTTAAATGATCCGTTTCTTACAAAATGGGTTAAGCCAGATGAGCACAATCCTATTGCGATTGCGGAAAAAGGGGTAAATGCGAGCGCGTTTCGTGACCCAACAACTGCTTGGAAGGATAAAAATGGACATTGGAAAATATTGGTTGGTAGTAAAAGAAAACATAGAGGGATGGCCTATTTATTTAGGAGTAGGGATTTTAAGAAATGGGTTCGGTCCAAACACCCGATCCATTCGGCGGCTAAAACGGGTATGTGGGAGTGTCCTGATTTTTACCCGGTTTTATTGAAAGGGAAAGAAGGGTTGGATACATCAATTGAAGGTGATCATGTTAAACATGTCTTAAAGAATAGTCTTGACTTGACTAGATATGAGTATTATACATTGGGTAAATATTATAGTGATGAGGATAAGTATGTTCCAAGTAATACTTCAGAAGATGGTTGGGGTGGCCTTAGATATGACTATGGTAACTTCTATGCTTCAAAGTCATTTTTTGATCAAAGTAAGAATCGTAGGATCCTTTGGGGTTGGGCTAATGAGTCTGACCCCCAAAAGGATGATGTTAAAAAAGGATGGGCTGGAATTCAGGCAATACCAAGAGTTGTGTGGCTTGATTCTAATGAGAAACAATTGGTACAATGGCCTGTTGAAGAATTGAATCAACTCAGAGATAAGGAAGTTAGTTTGAACAATAAAAAGCTTGAAAAGGGTGAATTTGTAGAAGTAGCTGGAATAACTGCTGCGCAGGCAGATGTTGAAGTTACTTTCTCATTTTCAAGCTTGGAAAAAGCAGAGGAATATGATCCAAAGTGGGTAAACGCACAAGATCTTTGTGCCCTAAAAGGTTCAAAAGTTGAAGGTGGGCTTGGGCCTTTTGGGCTTTTGACTTTGGCTTCAGAAAATTTTGCAGAGTTCACTCCTGTGTTCTTTAGAGTCTTCAAAGCTCCAAATAAGCATGTAGTTCTCTTGTGCTCTGATGCTAGCAGTTCTTCTTTGAAGAGTGAAATGTACAAGCCATCATTTGGTGGATTTGTAGATGTAGATTTAGCAACAAACAAACTTTCACTTAGGAGTTTGATTGATCACTCAGTAGTGGAAACTTTTGGAGAAGGAGGGAAAACAAACATTTTATCTAGGGTTTATCCAGAACTAGCAGTGACACATCAAGCTCATTTGTATGTGTTTAACAATGGTACTGAACCAATCACTGTGGAGAAACTTACAGCATGGAGTATGAAGTCTGCTAATATAAAAAGCAGTTAG 1533 0.3907 MYYNGYYHLFYQYNPKGSVWGNIVWAHSVSKDLINWDALEPAIYPSKPFDKYGCWSGSATIVPDKGPIILYTGIIDDKMTQVQCYAIPEDLNDPFLTKWVKPDEHNPIAIAEKGVNASAFRDPTTAWKDKNGHWKILVGSKRKHRGMAYLFRSRDFKKWVRSKHPIHSAAKTGMWECPDFYPVLLKGKEGLDTSIEGDHVKHVLKNSLDLTRYEYYTLGKYYSDEDKYVPSNTSEDGWGGLRYDYGNFYASKSFFDQSKNRRILWGWANESDPQKDDVKKGWAGIQAIPRVVWLDSNEKQLVQWPVEELNQLRDKEVSLNNKKLEKGEFVEVAGITAAQADVEVTFSFSSLEKAEEYDPKWVNAQDLCALKGSKVEGGLGPFGLLTLASENFAEFTPVFFRVFKAPNKHVVLLCSDASSSSLKSEMYKPSFGGFVDVDLATNKLSLRSLIDHSVVETFGEGGKTNILSRVYPELAVTHQAHLYVFNNGTEPITVEKLTAWSMKSANIKSS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0718 510 Gene3D Glycosyl hydrolase domain; family 43 1 318 IPR023296 -
Tpr6g0718 510 CDD GH32_Fruct1-like 1 294 - -
Tpr6g0718 510 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 305 IPR013148 -
Tpr6g0718 510 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 508 - -
Tpr6g0718 510 SMART glyco_32 1 462 IPR001362 GO:0004553|GO:0005975
Tpr6g0718 510 SUPERFAMILY Concanavalin A-like lectins/glucanases 305 505 IPR013320 -
Tpr6g0718 510 Pfam Glycosyl hydrolases family 32 C terminal 308 501 IPR013189 -
Tpr6g0718 510 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 1 508 - -
Tpr6g0718 510 Gene3D - 319 502 - -
Tpr6g0718 510 SUPERFAMILY Arabinanase/levansucrase/invertase 1 306 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0718 Tpr-Chr6 5934362 5937804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0718 1 503 Glycoside Hydrolase AT3G52600 64.729 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0718 K01193 - gmx:100777418 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0718 6 5934362 5937804 Tpr6g0718 6 5934362 5937804 ECH