Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0710 ATGTTTTCCTCTAGTATTTTGCTTCAGATTCTGGCATGTGCCATATACAACAATTGGTGGCCCATGTTATCAGCTCTGATGTATGTGCTGGTACCTATGCCTTGTTTATTCTTTGGAGGTGGGTCGACTCAATTTCTGATGAGCCGTGATGGTGGGGGTTGGATGGATGCTGCAAAGTTTTTGACTGGAGCATCAGCTGTGGGGAGCATAGCCATTCCTATAATCCTTAAGCATGCTCACATGATTGAGACTGGAGCAATGCTCATTGAGCTAGTATCGTTCTTCATATTTATATGCACTGTCATGTGTTTCCACCAAGCGAGCCTTGACGACGATTGGTGA 342 0.4474 MFSSSILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWMDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVMCFHQASLDDDW* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0710 113 Pfam Vacuolar protein sorting 55 2 107 IPR007262 -
Tpr6g0710 113 PANTHER LEPTIN RECEPTOR-RELATED 1 112 IPR007262 -
Tpr6g0710 113 PANTHER RH04491P 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0710 Tpr-Chr6 5870885 5875696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0710 1 108 EF-hand Containing Proteins AT1G32410 54.955 4.80e-39 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0710 - - gmx:100800586 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0710 6 5870885 5875696 Tpr6g0710 6 5870885 5875696 ECH