Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0707 ATGTCTCAGTCTAAGAAATTGACGCCGAATCTGGATCAGCACAGTACAAAGTTACTCAATCTTACTGTGCTCCAACGCATGGATCCATTCATCGATGAGATTCTCTTCACCGCTGCGCATGTTTCGTTCTACGACTTCAACATCGAAACGAATCAGTGGAGTCGTAAAGATGTTGAAGGATCTCTCTTTGTTGTTAAGAGGAATGCTCAACCGCGGTTTCAATTTATTGTAATGAATCGAAAGAATACAGATAATCTAGTGGAAAATCTATTGGATTTTGAGTATGAACTTAAAAAGCCGTACTTGTTATATCGGAATGCATCCCAAGAAGTTAATGGTATATGGTTTTACAATCCAGAAGAATGTGAAGAAGTTGCAAATCTCTTTAATAGGATTCTTAATGCATACCCAAAGACACTTCCAAATACAACAATGCCTTCTGACAAAAGTGAGTTTGAGGAACTTGGCCAAGTGTCAACAATAAGGGAAAGCCCTATAGAGTCATCTTCAGCTGCTGCTGCTGCAACTGAAGCTCCTGAAGATTCTATTTTCACAAATTTCTTCAACACATGTAAGGTTACTGGACCTTATGCTTCAAATGTGGAAAGTTTTCACCAGCCCTACCAGTCTGCAAGTGTCACTTCTACTGTTCCTGGTGGTTTTATGTCTCCTATGCCTTCTATTCAAATGCCATCTGCCTCTATTGAAACAACCAACAGTGCCTATCCGGTTTCCAATCTTGTTAAGCCTTCTACTTTTCTTACGCCCAACTCTTTATTACCATTAATTCCACCTATTTCTTCACCTGTGCAACCTAGTATGGCTGTTCGTCATTCACAAAATCTGCCACGCCAATATGGCACTCCACTGCTTCAACCCTTCCCACCTCCTAATCCTCCTTCTTCTCTTACCCCTATTTCTAGCTCCATGCCAAATAGACCGGTTATCAGCAGGGATAAAGTCCGTGATGCACTTGTATCATTGGTTCAGGATGATAAGTTCATTGACATGATGTTCCAAACATTGTTTAAGATGCATAATTCATGA 1047 0.404 MSQSKKLTPNLDQHSTKLLNLTVLQRMDPFIDEILFTAAHVSFYDFNIETNQWSRKDVEGSLFVVKRNAQPRFQFIVMNRKNTDNLVENLLDFEYELKKPYLLYRNASQEVNGIWFYNPEECEEVANLFNRILNAYPKTLPNTTMPSDKSEFEELGQVSTIRESPIESSSAAAAATEAPEDSIFTNFFNTCKVTGPYASNVESFHQPYQSASVTSTVPGGFMSPMPSIQMPSASIETTNSAYPVSNLVKPSTFLTPNSLLPLIPPISSPVQPSMAVRHSQNLPRQYGTPLLQPFPPPNPPSSLTPISSSMPNRPVISRDKVRDALVSLVQDDKFIDMMFQTLFKMHNS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0707 348 PANTHER DECAPPING ENZYME 1A, PUTATIVE-RELATED 1 347 - -
Tpr6g0707 348 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 1 347 IPR010334 GO:0000290|GO:0008047|GO:0043085
Tpr6g0707 348 Gene3D - 7 135 IPR011993 -
Tpr6g0707 348 SUPERFAMILY PH domain-like 19 138 - -
Tpr6g0707 348 CDD EVH1-like_Dcp1 19 133 - -
Tpr6g0707 348 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0707 Tpr-Chr6 5852217 5856944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0707 K12611 - gmx:100780081 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0707 6 5852217 5856944 Tpr6g0707 6 5852217 5856944 ECH