Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0701 ATGGCAATTGTCATCTTTCACAACAAAATTATTCTCTTTTCTTTATTTTCTGTTCTGTTCTTCACCTTCTGTTCTTCCCATATCATACCCAAATTTCCTTCTTCATTGATTCGTCCAGAACAACAACTAAACTCTGGTTCTGCCAAAAATGGACTTTACAAAACAAAATACTTCACCCAAATACTTGATCATTTCAATTATAACCCTCAAAGTTATCATAAATTTCAACAAAGGTATCTCATCAATGATACTTATTGGGGTGGTGCCAAGAAGAAAGCTCCAATCTTTGTCTACACCGGAAATGAAGGGAACATAGAATGGTTTACAGAAAATACTGGTTTTATGTTTGAGAAAGCACCTTATTTCAATGCTCTTTTGGTTTTTATTGAGCATAGATTTTATGGAAAATCATTGCCATTTGGAGGGAACAAGAAAGTTGCATATGCAAATAGTAGCACACTTGGATATCTGAGTTCTACACAGGCATTAGCTGATTATGCAACTCTCATCATTGATTTGAAGAAGAATTTGTCAGCTACTGAATCCCCTGTTGTTGTGTTTGGAGGATCCTATGGAGGAATGTTGGCTGCTTGGTTTAGAATAAAGTATCCACACGTTGCAATTGGAGCTTTAGCATCATCAGCTCCAATTCTTCATTTCATGGATTTGGTTTCACCATATGTCTTCAGCAATACTGTCACACAAGACTTCAGGAGTGAGAGTGAGAATTGTTACAAAGTGATAAAAGGGTCATGGAAGCTTATAGAAGAAACAGCCAAAAAACATGGAGGATTGGAATTACTAAGGAAATCATTCAGAATATGCAACAATTATATGGATGCAAATGCTTTGGAAGGTTGGCTTCAAACTGCTTGGATTTATACAGCAATGACAGATTATCCAACACCAACCAATTTCCTTAATCCCTTGCCAGCATATCCTGTGAGAAAGATGTGCGAGGCAATTGATAGGTCAGTGACAGAAAAACATAGTAGGAGTACATTTGACAAGTTGTATAGTGCTGCAAATATCTACTACAACTATAGTGGTACATCTAAGTGTTTCGATTTAAATGATAATTCCGATCCTCATGATCTTGGAGGATGGCAATGGCAGGCTTGTACTGAGATGATAATGCCACTAGGTTCAAACAAGGAAAGCATATTTCCTGAATCAAAGTGGTCATTCAATGACAGATCTGCATCCTGCAAATTTTTCTACAACGTACTGCCAAGGCCCAACTGGATTACATCAGAATTTGGCGGCCATGATATTGAGTTAGTTCTCAAAAGATCTTCTGGTAACATCATATTTTTCAATGGTTTAAGAGACCCTTGGAGTGGTGGAGGAGTGTTGAAGAATATATCCAAAACTATAATTGCTATAGTTGCAAAAGAAGGAGCTCATCATGTGGATCTAAGATACTCAACTAAGGAAGATCCAAAGTGGCTTAAAGATATAAGGAAACAAGAGGTAAAGATTATAGAAAGTTGGATATCCCAATACCATCAAGACTTGGATACATCCTATAGTGTGAATTAA 1542 0.3677 MAIVIFHNKIILFSLFSVLFFTFCSSHIIPKFPSSLIRPEQQLNSGSAKNGLYKTKYFTQILDHFNYNPQSYHKFQQRYLINDTYWGGAKKKAPIFVYTGNEGNIEWFTENTGFMFEKAPYFNALLVFIEHRFYGKSLPFGGNKKVAYANSSTLGYLSSTQALADYATLIIDLKKNLSATESPVVVFGGSYGGMLAAWFRIKYPHVAIGALASSAPILHFMDLVSPYVFSNTVTQDFRSESENCYKVIKGSWKLIEETAKKHGGLELLRKSFRICNNYMDANALEGWLQTAWIYTAMTDYPTPTNFLNPLPAYPVRKMCEAIDRSVTEKHSRSTFDKLYSAANIYYNYSGTSKCFDLNDNSDPHDLGGWQWQACTEMIMPLGSNKESIFPESKWSFNDRSASCKFFYNVLPRPNWITSEFGGHDIELVLKRSSGNIIFFNGLRDPWSGGGVLKNISKTIIAIVAKEGAHHVDLRYSTKEDPKWLKDIRKQEVKIIESWISQYHQDLDTSYSVN* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0701 513 Pfam Serine carboxypeptidase S28 60 489 IPR008758 GO:0006508|GO:0008236
Tpr6g0701 513 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 4 506 - -
Tpr6g0701 513 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 4 506 - -
Tpr6g0701 513 Gene3D alpha/beta hydrolase 57 499 IPR029058 -
Tpr6g0701 513 Gene3D Serine carboxypeptidase S28, SKS domain 225 393 IPR042269 -
Tpr6g0701 513 SUPERFAMILY alpha/beta-Hydrolases 113 473 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0701 Tpr-Chr6 5795149 5802747 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0701 K01285 - gmx:100781698 804.668