Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0696 ATGGCTTCAATTGCCAAAAGGCTTGAAGGAAAAGTAGCAATAATAACAGGAGGTGCTAGTGGAATTGGTGCTGCCACTGCTAAACTATTTGTTGAACATGGTGCCAAAGTTATCATTGCTGATATTCAAGATGAATTAGGCCAATCTCTTTGCAATGAACTTGCCACAAAAAACATTCTCTATGTTCATTGTGATGTAACTAATGAATCAGACATCAAAAACGTGGTTGATACCGCGGTTTCAAACTACGGTAAACTTGACATCATGTTTAATAATGCTGGTACCTCAGATGACAAAAACAGAACAATTTTGGATTATGATAGTGAAGCTTTCAAAAGGGTATTTGATGTTAATGTTTATGGAGCTTTCTTGGGTGCTAAGCATGCTGCTAAGGTAATGATCCCACAAAAAAAAGGTGTTATTCTTATTACTGCAAGTGTTGCTACAGCAACTGCTGGTGAATCAACACATGCTTATTCATCTTCAAAGCATGCATCAGTTGGACTTATGAAGAATTTGTGTGTAGAATTAGGACAATATGGGATTAGAGTTAATTGTATTTCACCAGGAGCAATTCCAACTCCAATTTTAACAAATGCATTGAATATGAACAAGAATGAAATGGAGAAAGTTTTGTCCTCAGTTGGTGTTTTGAAAGAAGCTATTCTTGAAGTTGAAGATATAGCTAATGCAGCACTTTATTTGAGCAGTGATGAATCAAAGTTTGTGAATGGAGTTAATATTGTTTTGGATGGAGGTTATAGCACTACCAATATGTCATTCACTTCTGCACTTATCAAACTTTTGATGAATGGCAACACCAATCACATTGATCAGTAA 840 0.3571 MASIAKRLEGKVAIITGGASGIGAATAKLFVEHGAKVIIADIQDELGQSLCNELATKNILYVHCDVTNESDIKNVVDTAVSNYGKLDIMFNNAGTSDDKNRTILDYDSEAFKRVFDVNVYGAFLGAKHAAKVMIPQKKGVILITASVATATAGESTHAYSSSKHASVGLMKNLCVELGQYGIRVNCISPGAIPTPILTNALNMNKNEMEKVLSSVGVLKEAILEVEDIANAALYLSSDESKFVNGVNIVLDGGYSTTNMSFTSALIKLLMNGNTNHIDQ* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0696 279 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 2 266 - -
Tpr6g0696 279 PRINTS Glucose/ribitol dehydrogenase family signature 12 29 IPR002347 -
Tpr6g0696 279 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Tpr6g0696 279 PRINTS Glucose/ribitol dehydrogenase family signature 133 149 IPR002347 -
Tpr6g0696 279 PRINTS Glucose/ribitol dehydrogenase family signature 159 178 IPR002347 -
Tpr6g0696 279 PRINTS Glucose/ribitol dehydrogenase family signature 180 197 IPR002347 -
Tpr6g0696 279 PRINTS Glucose/ribitol dehydrogenase family signature 218 238 IPR002347 -
Tpr6g0696 279 Gene3D - 2 270 - -
Tpr6g0696 279 Pfam Enoyl-(Acyl carrier protein) reductase 17 255 - -
Tpr6g0696 279 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 146 174 IPR020904 GO:0016491
Tpr6g0696 279 CDD secoisolariciresinol-DH_like_SDR_c 7 255 IPR045309 GO:0016616
Tpr6g0696 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Tpr6g0696 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 IPR002347 -
Tpr6g0696 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 IPR002347 -
Tpr6g0696 279 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 256 IPR036291 -
Tpr6g0696 279 PANTHER SECOISOLARICIRESINOL DEHYDROGENASE-RELATED 2 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0696 Tpr-Chr6 5771005 5772445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0696 8 265 Acyl Lipid Metabolism Gene Families AT1G63380 28.839 1.50e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0696 - - aprc:113863381 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0696 6 5771005 5772445 Tpr6g0696 6 5771005 5772445 ECH