Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0694 ATGGGTAACGCTCAGTCTCCTCCCACTGATCCTCGATATCTTTCAGCATCCAGAGCTTTTAGTCAAAAGGAACTTCAAGACTTAAAGTCTCTGTTCGATTCTTTGGCATCTCAATCACAGAGCAATGGCAAATACATTTCTCCTTCAGTTTTTCAGTTATATTTCAAACTTCATGGTCCTGTTGGAGAGAGGATGTTTGATTTAGTTACTCAGGAACGCAAGGATCAGAAGTTAACCTTTGAAGACCTTGTTGTTACTAAAGCTACTTATGAGAAAGGAACTAAAGATGAAATTGAAGAATTCATTTTTCGCTTATTAGATGTATCCGGAGATAATTTTGTAGGGAGGTCTGATTTGGAATCGGTTATGATTGCCATTTTTAATGATATATTATGCATAAAAGGTTCTGAAGATGGATCAAGTTCACATCAAGATATTGTCAGCATATTTCTGAATGCTGCAACTTTCTCCATACATGATGAAAAGTGCACTGAGGAGGCTATGTCGTTTGAAGATTTCAGAAGTTGGTGTACTCATCTCCCAACTGCGAGGAAGCTTCTTGGAAGCTTGCTTTTGCCACCAGATTCAGGACGGTCAGGTACTCAAATTCCTAATCTACTGACCCCAAAGGATATTGATTCTAACATTGTACTTTTGAGAAAGGAGTATGCTTGGCATATAGGAGGAGCACTTTCTCAGCATGAGCTAGAAGATTGGAAGCTTTTGTATCATAGTTCTGTTAATGGTCTTAGTTTCAATACATTCTTGGGCAACATTTCAAATCACGAAGGCCCAACTGTGCTAATTATCAAGGATAAAGATGGTTATATATATGGAGGGTATGCTTCTCAACAATGGGAGCGGCATGCTGAATTTTATGGAGACATGAAATCTTACATTTTTCAACTTAATCCAAAGGCATCTATATTCAGGCCGACCGGAGCAAACACTAATCTACAATGGTGTGCTGTTAACTTCAGTTCAGAGGACATTCCAAATGGCATTGGTTTTGGGGGAAAAGAAAGTCACTTTGGGTTATTTATCTCAGCAAACTTTGATCAAGGGCATACATTTTCATGTTCAACATTTGGTAGCCCTTGCCTCTCCAAAACTAACAGTATAATACCTGAAGTAATAGAATGCTGGGGAGTGACACAAGGTTTGGTACAAGGCAAGAATGATGCTGTTAAGGGCACTGTACTTGAAAGGTTTAAGGAAGATAGGCATATGCTCAATATGGTAGGGCTAGCCAATTCTAGTGAGTAA 1266 0.3894 MGNAQSPPTDPRYLSASRAFSQKELQDLKSLFDSLASQSQSNGKYISPSVFQLYFKLHGPVGERMFDLVTQERKDQKLTFEDLVVTKATYEKGTKDEIEEFIFRLLDVSGDNFVGRSDLESVMIAIFNDILCIKGSEDGSSSHQDIVSIFLNAATFSIHDEKCTEEAMSFEDFRSWCTHLPTARKLLGSLLLPPDSGRSGTQIPNLLTPKDIDSNIVLLRKEYAWHIGGALSQHELEDWKLLYHSSVNGLSFNTFLGNISNHEGPTVLIIKDKDGYIYGGYASQQWERHAEFYGDMKSYIFQLNPKASIFRPTGANTNLQWCAVNFSSEDIPNGIGFGGKESHFGLFISANFDQGHTFSCSTFGSPCLSKTNSIIPEVIECWGVTQGLVQGKNDAVKGTVLERFKEDRHMLNMVGLANSSE* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0694 421 SUPERFAMILY EF-hand 3 190 IPR011992 -
Tpr6g0694 421 SMART 109ultra 216 385 IPR006571 -
Tpr6g0694 421 ProSitePatterns EF-hand calcium-binding domain. 107 119 IPR018247 -
Tpr6g0694 421 Pfam TLD 241 384 IPR006571 -
Tpr6g0694 421 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 413 - -
Tpr6g0694 421 ProSiteProfiles TLDc domain profile. 217 385 IPR006571 -
Tpr6g0694 421 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 413 - -
Tpr6g0694 421 Gene3D - 1 188 - -
Tpr6g0694 421 ProSiteProfiles EF-hand calcium-binding domain profile. 94 129 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0694 102 420 EF-hand Containing Proteins AT5G06260 61.491 2.74e-146 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0694 - - gmx:100804508 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0694 6 5755098 5759398 Tpr6g0694 6 5755098 5759398 ECH