Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0692 ATGTGTAACCGCAAAACCCTATCGGATTCAATTCCCCTTTCTCCACGACGATCTAATCTACCCGTTCTAGCCAGATCAGTGTGGAGTTCCAATCTCGAATTCGAATTCGATTTGATTCGTTCCATTGTCGATTCATTTCCTCTCATTTCTATGGATACTGAATTTCCCGGTGTTATTGTCCGTGCTGATTCCGGTGACCCTTCGTTCAAGCACCGTGGTGCTTCTCTTTATGCTCTTTTGAAAGCGAATGTTGATCGTTTGCATTTGATACAGATTGGTCTTACTCTCTCTGATCATAAAGGTAATCTTCCAACCCTAGGTAGTTCCAAATCTTATATTTGGGAATTTAACTTCAAAGACTTTGATGTGGCGCGTGATGATCACGCTGCTGATTCTGTTGAGTTGTTGAGGCGTCAGGGTATTGATTTTGAGAAGAATCGTGAGTTTGGGATTGACTCTGTTCGGTTTGCTGAGTTGATGATGGCGTCTGGTCTTGTATGTGATGATTCTGTTAGCTGGGTTACTTTTCATAGTGCTTATGATTTTGGTTATCTTGTGAAGTTGCTGACTCAGCGTGCATTACCGGAGGATTTGGAGGAATTTCTCGGTATTGTGAAGGTGTTTTTTGGTGATAAGGTTTTTGATGTGAAGCATTTGATGAGGTTCTGCTCGAACTTGCACGGTGGGTTGGATAGGGTTTGTCAGTCGTTGAAGGTGGAAAGGATTATAGGGAAGAGTCATCAGGCGGGTTCTGATAGTTTGCTTACTTTGCATGCTTTTCAGAATATCAGAGAGCTTTACTTCGGGAAAGCAGATGGGTTTGTCAAATATGCTGGTGTGTTGTATGGATTAGAAGTTTGCTGA 864 0.4236 MCNRKTLSDSIPLSPRRSNLPVLARSVWSSNLEFEFDLIRSIVDSFPLISMDTEFPGVIVRADSGDPSFKHRGASLYALLKANVDRLHLIQIGLTLSDHKGNLPTLGSSKSYIWEFNFKDFDVARDDHAADSVELLRRQGIDFEKNREFGIDSVRFAELMMASGLVCDDSVSWVTFHSAYDFGYLVKLLTQRALPEDLEEFLGIVKVFFGDKVFDVKHLMRFCSNLHGGLDRVCQSLKVERIIGKSHQAGSDSLLTLHAFQNIRELYFGKADGFVKYAGVLYGLEVC* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0692 287 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 16 286 IPR039637 GO:0004535|GO:0030014
Tpr6g0692 287 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 16 286 - -
Tpr6g0692 287 Pfam CAF1 family ribonuclease 27 151 IPR006941 -
Tpr6g0692 287 Gene3D - 12 286 IPR036397 GO:0003676
Tpr6g0692 287 SUPERFAMILY Ribonuclease H-like 20 285 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0692 Tpr-Chr6 5721572 5722927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0692 K12581 - gmx:100790027 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0692 6 5721572 5722927 Tpr6g0692 6 5721572 5722927 ECH