Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0667 ATGGCCACTAATTATCAACCTTCAAACGCTTTCTCCTTCTTTTCCAAAGGTTGGAGAGATGTTCGTGACTCAGCTGACGCGGATCTACGTTTAATGAAAGACCGAGCCAACTCGTTCAAAAACCTAGCCACTTCTTTCGAAAGTGAAATCGAGAATTTCTTAAATTCGGCTGCTCCAGCGTTTTCTGTTCCGGCGATAAGTTCTCCGCCTCCGGCGGAGATTGAATTCGTGAAGAAACTTCAGCCGAAGTTGTCGGAGATTCGGAGAGCGTATTCGTCTCCGGATTTTAGTAAGAAGGTTCTGGAAAAGTGGAGGCCGAGTGCGAAGATTCGGATTGATTTGTCAGCTATTAAGAACGCGATTGTTTCGGAGGAATTTGGTGATGGGATTGTGGATTTTGAGAGAGGGTTTAAGGGAAGGAGGTTAAGTTTTTGGGAAGGGTTCAAAGGTGAAATTGAAAGTGAGAGTGAAACTAGGGTTTGGGAACCAATTCGAGTTTTGAAAACTAGAATTAAAGAGTTTGAGAAACGTAGTTCATCTTTTGATGGATTCAAGAACAGTGAATTTCTTGAGAAACTTAAGTCTAGCTTGAAATCGATGTACAAGGAACCGCAAGAGTCAAAGGAAGTGCCACCATTGGATGTACCTGAACTTCTGGCCTACTTTGTGAAACAGTCTGGGCCATTTTTGGATCAACTTGGAGTCAGCAGAGATACATGCGACAAGATAGTTGAAAGCTTGTATAGCAAACGCAAGAACCAATTTCTACTGCAATCTCTTTCTGGGGAAGAATCTTCTTTACTCGGGAATGGAAACATAAATGATGAATTGGATTTGCGAATAGCTAGTGTCCTTCAGAGCACAGGGCACCGGTATGAAGGTCATGCAAAGCAGGATTTGTCTAACAAGGAAAGACATGTTGCAATTGTCACAACCGCTAGTCTTCCTTGGATGACAGGAACAGCTGTAAACCCACTATTTCGAGCTGCATATTTATCACAATCTAAAAAGCAGAAAGTCACTCTGCTGGTTCCATGGCTTTGTGAATCGGATCAGGAACTAGTTTATCCCAGCAACGTCACTTTTACTTCGCCAGAAGAGCAGGAAGGTTATATTCGTAACTGGCTTGAGGAAAGGATTGGTTTTAAGGCAGACTTCAAGATTTCTTTTTATCCCGGGAAGTTTTCAAAGTCAAGACGTAGTATAATGCCCGTTGGAGATACTTCTCAATTTATACCATCTAAGGATGCTGACATTGCTATCCTGGAAGAACCAGAACATTTGAATTGGTATCATCATGGGAAACGTTGGACCGATAAATTCAACCATGTTGTTGGCATTGTTCACACAAATTACTTAGAATACATCAAAAGGGAGAAAAATGGAGCACTCCAGGCATTTTTTGTGAAACACATCAACAACTGGGTTACAAGAGCATACTGTGACAAGGTTCTCCGTCTCTCGGCGGCTACTCAGGATGTACCCAAGTCAGTAATTTGCAATGTTCATGGCGTGAATCCCAAGTTCTTAAAAATTGGAGAAATGGTTGCTGCAGAGAGGGAGCTAGGGCAGAAAGCTTTCACAAAAGGAGCATATTTCTTGGGAAAGATGGTGTGGGCAAAGGGATACAAGGAGATGATAGATTTATTAGGAAAGCATAAGACAGACCTTAATGGCTTCAAGTTAGATGTATTTGGAAGTGGAGAGGATGCTCATGAAGTTCAGAGTGCAGCTAAAAGGTTGGATTTGAATCTCAACTTTCAGAAAGGAAGAGATCACGCAGATGATTCCCTTCACAGGTACAAAGTCTTCATAAATCCTAGTATCAGTGATGTGCTATGCACAGCTACCGCAGAGGCACTTGCAATGGGAAAATTTGTAGTTTGTGCTGATCATCCATCAAATGAGTTCTTTACGTCATTTCCCAACTGTTTGGTTTACAAGACACCTGAAGACTTTGTAGTAAAAGTAAAAGAAGCGTTAGCAAATGAGCCTTATCCTCTCACACCCGAACAGAGATATAAACTTTCTTGGGAAGCGGCAACTCAAAGATTTATGGAATATTCCGAGCTTGACCAAATCCTGAACAAGGAAAATGATAGTGCAAAGTCAGGTAGAGATAAGGGAAGACTCATTGGCAAGTCGGCGTCAATGCCTAATCTTTCAGAACTAGCAGATGGAGGCTTAGCTTTTGCTCACTACTGTCTCACTGGGAACGAGTTCCTGAGATTATGTACTGGAGCAACACCTGGGACACGTATTTTTGACAAGCAGCACTGTAAAGACCTTAATCTCTTGCCCCCACAGGTGGAAAATCCTATCTATGGCTGGTAA 2334 0.422 MATNYQPSNAFSFFSKGWRDVRDSADADLRLMKDRANSFKNLATSFESEIENFLNSAAPAFSVPAISSPPPAEIEFVKKLQPKLSEIRRAYSSPDFSKKVLEKWRPSAKIRIDLSAIKNAIVSEEFGDGIVDFERGFKGRRLSFWEGFKGEIESESETRVWEPIRVLKTRIKEFEKRSSSFDGFKNSEFLEKLKSSLKSMYKEPQESKEVPPLDVPELLAYFVKQSGPFLDQLGVSRDTCDKIVESLYSKRKNQFLLQSLSGEESSLLGNGNINDELDLRIASVLQSTGHRYEGHAKQDLSNKERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSKKQKVTLLVPWLCESDQELVYPSNVTFTSPEEQEGYIRNWLEERIGFKADFKISFYPGKFSKSRRSIMPVGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDVPKSVICNVHGVNPKFLKIGEMVAAERELGQKAFTKGAYFLGKMVWAKGYKEMIDLLGKHKTDLNGFKLDVFGSGEDAHEVQSAAKRLDLNLNFQKGRDHADDSLHRYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFTSFPNCLVYKTPEDFVVKVKEALANEPYPLTPEQRYKLSWEAATQRFMEYSELDQILNKENDSAKSGRDKGRLIGKSASMPNLSELADGGLAFAHYCLTGNEFLRLCTGATPGTRIFDKQHCKDLNLLPPQVENPIYGW* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0667 777 Pfam Glycosyl transferases group 1 532 666 IPR001296 GO:0016757
Tpr6g0667 777 CDD Glycosyltransferase_GTB-type 436 643 - -
Tpr6g0667 777 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 9 777 - -
Tpr6g0667 777 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 9 777 IPR044525 GO:0046481
Tpr6g0667 777 Gene3D Glycogen Phosphorylase B; 529 683 - -
Tpr6g0667 777 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 307 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0667 Tpr-Chr6 5491221 5498067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0667 9 600 Glycosyltransferase AT3G11670 69.622 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0667 K09480 - gmx:100796354 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0667 6 5491221 5498067 Tpr6g0667 6 5491221 5498067 ECH