Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0666 ATGGATATTGAGTCAACAAATCAAGTAAACAAGATTGGAATTTTCTCTCGTTTGAGTGGATTCTTCAAGGATTTACCTATGAACTTCAAGTCCAAGGTTATCAATGCAAAAAATAGTGTTAAGAAGATTGGAAAAGATGATCCTAGAAGAATAATTCACTCATTGAAAGTAGGATTTGCTCTTACAGTTGTGTCATTGTTTTACTATTCAAGGCCACTTTATGATGGCTTTGGAGTTGCTGGAATGTGGGCAGTTCTTACTGTGGTAGTAGTATTTGAATTTACTGTAGGTGCAACCCTTAGTAAAAGTATAAATAGAGGATGTGCTACATTAATAGCTGGTGCTTTAGGGGTTGGAGGGCATCACTTAGCCACTATTGTTGGTGAAAGAGGAGAAGCTTTTGTCCTAGGGACCCTTGTCTTCATTCTAGCTGCAGGGGCAACATTTTTTAGATTTGTTCCAAAGATCAAGGCAAGATATGACTATGGGATGGTGATATTTATATTGACATTCTGTTTGGTTACTGTCTCGGGGTACAGAGTGGAGGAACTTCTTGAACTTGCACATCAAAGACTTTCAACAATTATTATAGGAGCTTCAACTTGCATGGTCATTTCCATATTTGTTTGTCCTGTTTGGGCAGGTGCAGACCTTCATAACTTGGTAGCTTCCAACATAGAAAAGCTAGCAAATTATCTTGAAGGATTTGAAGGTGAATATTTTCACTCATTAGAGGATAAAGAAAAATCCAAGTCACTTCTACAAGGATATAAAAGTGTTCTCAATTCAAAAGCAATTGAAGAGTCTTTGACAAATTTTGCAAGGTGGGAACCAGGACACGGTGGTTTTAGCCTTCGCCATCCTTGGAAGCAATACTTGAAAATCGGAGTACTTGTTCGTGAATGTGCATACAAGATTGAAACTTTAAACACGTACCTTAACCCTGAAATCCAAGCTTCTTTGGAATTCAAGTGTAAAATTCAAGAACCATGCACAAAGATGAGTTCAGAATCTAACAAAGCATTAAAGGCAATATCATCATCAATGAAAACAATGACAAATCCCTTAGCAGCTAAAAGTCACATAGAAAATTCAAAATCTGCAATTGAAGAACTCAAAGTTACACTAGAAGTCATTTCCTTAGAGGATGTTGAACTTCTAGCTATAATTCCAGTTGCAACAGTTGCTGCAATACTTGAAGAAATCACTTTTTCTGTGGAGAAAATCTATGATTCTGTTTCTGAGCTTTCTAATTTAGCACATTTCAAGAGTGTAGAGCCCAATGTCTCACCAGAAAAGCCACCTCTACTTCATAGAGGAATCATAAAACCTGTTGTGGACATTGATAATAACACGCCGCCGCATGTTGAAATCACAATCCAAGATTTAAGTACAGAGTCATCGGAAAAAGCTCGAAAAGACACCGCCGAAATCCTTCAAACATAA 1446 0.3728 MDIESTNQVNKIGIFSRLSGFFKDLPMNFKSKVINAKNSVKKIGKDDPRRIIHSLKVGFALTVVSLFYYSRPLYDGFGVAGMWAVLTVVVVFEFTVGATLSKSINRGCATLIAGALGVGGHHLATIVGERGEAFVLGTLVFILAAGATFFRFVPKIKARYDYGMVIFILTFCLVTVSGYRVEELLELAHQRLSTIIIGASTCMVISIFVCPVWAGADLHNLVASNIEKLANYLEGFEGEYFHSLEDKEKSKSLLQGYKSVLNSKAIEESLTNFARWEPGHGGFSLRHPWKQYLKIGVLVRECAYKIETLNTYLNPEIQASLEFKCKIQEPCTKMSSESNKALKAISSSMKTMTNPLAAKSHIENSKSAIEELKVTLEVISLEDVELLAIIPVATVAAILEEITFSVEKIYDSVSELSNLAHFKSVEPNVSPEKPPLLHRGIIKPVVDIDNNTPPHVEITIQDLSTESSEKARKDTAEILQT* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0666 481 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 8 1 442 - -
Tpr6g0666 481 Pfam Aluminium activated malate transporter 42 417 IPR020966 GO:0015743
Tpr6g0666 481 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 442 - -
Tpr6g0666 481 Coils Coil 362 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0666 Tpr-Chr6 5484482 5487488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0666 1 462 Miscellaneous Gene Families AT3G11680 56.900 3.72e-175 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0666 - - aprc:113860951 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0666 6 5484482 5487488 Tpr6g0666 6 5484482 5487488 ECH