Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0662 ATGGATCCGGCGAGGACGCCACTCGGACAAATGCTACTTGAAGAAATCACGCCGGTTGTTATGGTCCTTTCTACTCCTTCCGTCGAAGAAACTTGCTTAAAAAACGGATTCTCCTTTCTTCAGATGCTTACTCCGTTTTGCTCTTTCAACAACATCGACGTTCCAGTGAGAACCGCTAGTGATCAGCCTTATCGGATTCATAAGTTCAAATTGCGTCTCTTCTATGGTTCTAATGTTAGGAAGCCTGATTTGAAGGTAGCTGAAGAGCAATTGATGCAAGTTATCACAGAATCGGGGGAGAAAGTTTTTTCGGAGTTGTGCTCTGATGCACCAAAAATTAATCAGGAACATGCGAGCTCTGAAGACAGAAATACACCATCCTGGTTTCAGTTTTTCAATAAAGAGCTTGTCCGCATGGCTTCCTTTTCAGACCACGAAGCTTTTGACCATCCCGTGGCTTGTCTTTTAGCTGTTTCTTCAAAAGATGAACATCCAGTTAGCAGATTTATTGACCTTTTTAATACCAACAAGCTTCCTTCCCTTCTAAAAGATGGTGCGATGGATCCAAAGATTTTAAAGCATTACTTGTTAGTGCATGACAATCAAGATGGCTCCGCAGACAGAGCAAGTAAAATATTGACAGAAATGAGGAATACATTTGGTGCAAGTGACTGTGTCCTGCTTTCTATAAATTCTTCCCCAGATGCTCCAATCAAGCATCAAGATAATCCTTGGGCTTCACAAATATGTGATGCCTCACCTGATCAAGATCTTGGTTGCTTTCTTAACATCGATGATATCAATGAGATCAAAGATTTAATGCAAGATTTATCATCTAAACACATCATTCCTAACATGGAGCAAAAAATCCGTGTGCTCAATCAACAGGTTTCTGCAACACGTAAAGGTTTTAAAAACCAAATAAAGAATTTATGGTGGAGAAAAGGGAAAGAAGATGGTGTAGATTCTCTCAATGGTCCTATGTATAACTTTAACTCAATTGAATCCCAGATTCGAGTTTTGGGTGACTATGCTTTCATGTTACGAGACTATGAACTTGCCTTGTCAAACTATCGCCTAATTTCGACAGATTACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGTGTGCAGGAAATGATGGGACTTACGTACTTCATGTTGGATCAATCAAGAAAAGAAGCTGAGTATTGCATGGAAAATGCTTTTAACACATATTTAAAACTTGGATTTGTGGGTCAGCAAAATGCTACACGATGTGGTCTGTGGTGGATAGAAATGTTGAAAGCACGAGATCTTTTTAAGGAGGCAGCTACAGTTTACTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCGTACTGTTATTTGTTGTCTAAACCCTCCATGTCACGCAAATATGGATTTCATCTAGTTCTTTCTGGGGAGCAGTATAAAAAGTGTGACCAGATCAAGCATGCAATTCGAACATACAGAAGCGCTCTTTCAGTTTTTAGAGGAACTACTTGGAGTTATATTAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGATGTAGCTGTCAAACATATGACAGAAATTTTGGCCTGTAGTCACCAGTCCAAGACGACACAAGAATTATTCCTAGGCGACTTCCTTCAAGTTGTGGAGAAAACAGGGCACACATTTGAGGTAACAAAACTTCAATTGCCCGTGATCAACATCTCTTCACTCAAGGTCATCTTTGAAGATCATCGAACTTTTGGATCACCTTCAGCTGTTAACACTAAAGAAGGCTTGTGGCATTCTTTGGAGGAAGACATGATACCATCATTTACTGCTGCCAAGACTAATTGGTTGGAGTTGCAATCAAAGCTTATCTCAAAAAAGAACACTCAATCAAATGTTTGTGTTGCAGGAGAAGCTGTGAAGGTTAATATTGAATTCATAAACCCTCTGCAAATTACAATTCCCGTATCTGGTGTTACACTTGTATGCAAATATTCTACTAGTACTGATGAACTTACATCAAATGCAAATGAATTGAGTGTGAAAACTGATAATGAAGTTGACCACTTCCGGGATACGAGCTCACACAATTCCTCCTTTTTAGTATCCGAGGTTGATTTCTCACTAGGAGGTGGTGAAACTACCATGGTTCAACTATCAGTGACTCCCAAGGAAGTAGGTACTCTTGAAATTCTTGGTGTTCGATGGAAACTATCAGGTGCGATAGTTGGCTTTCACAACTTTGAGTTGAGCCACCCGAAGAAGAATATTGTAAAAGGAAGAAGAAAAGCAAAGCAGTCGCCCAATGAGAAATTTAAATTTATGGTGATCAAGAGTATACCCAAGATTCAGGGTACTATCCAATCTTTACCTGGAAAGGCATATGCTGGAGATTTACGGCAACTTATGCTGGAGTTGAGGAATCCATCAGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCACCCTAGATTCCTGATTGTTGGGAATCAAGAAAATGTGAAATTAGAGTTTCCTGGTTGCTTAACAAAAAAGTCAGATTCAGTGCAAAGTGGTGCACATGCTAATCCTAATATGATGTCTGAAACAGTCTTTTCGTTTCCGGCGGACACTTCAGTTCAAGGTGAAACACCCTTATCATGGCCTCTTTGGTTTAGGGCTGCTGTTCCTGGTGACATTTCTCTTTATATGAGCATTTATTATGAGATTGAAGATATATCTAGTGTCATTAGATATCGCACTCTTCGCTTGCATTACAATGTGCAGGTATTACCATCATTAGATGTCTCATTTCAAATCAGTCCTTCTCGATTAAGAATACAAGATTTTCTTGTTAGATTGGATATTGTTAACAAGACAAGCTCAGAAAGTTTCCAAGTTTATCAGTTGTCATCTATTGGGCATCACTGGGAAATATCATTACTTCAACCTCCTGAGGCTATTTTCCCTTCGCAAACGCTGATGGCTGGTCAAGCCATATCATGTTTCTTCACATTGAAGAATTCAAGGAGATTATCGACGTTGGAACACAACATATCTACCTTGCCTCTCGGAAGTGATGTGTTATTGGTTCCTCAATGCAGTGAGGATTTAGTTTACAATACAAACAATGTACCTTTGGTCAATTTCCACTATTTTGAAAGATTGCAGCAGAAAGTGTTACACGAGGATCTAGGTGACTTAAATACCGTTGATTTGGTGTTGATCTCTCGGCCTCTCAACAGTAGCATCAGCCCTGGTTTATCCGATCCTCCTCATGTTATGTCTCACCATACATGTCACTTAAGTACTGCTAGCACGGGCCCCATTTCATGGCTAGTGGATGGACCTCAAACCTTGCATCATGACTTCTCTGCATCCTTCTGCGAAATAAATCTAAAGATGCATCTTTACAATTCATCTGATGCCACTGCTTTTGTGCGCATTGACACCACAGATTTTGATGGTAGTGGTGGACATATGAACAGTGTGAACGCGATTCAATCAGCAACTCCTGATAACCAAGCAGGATGGCATGATGTCACACCAGTGACTGAAATCAAGGTAACTCCCAATGCTCTCGAAGCCCAACCAGGAAAGGTAGTATTATTGGAAAGTGTTTCCCCATACATTTGGTCTGGATCAAGCTCGACCAATATCCACCTTGAGCCCATGTCCTCAGCAGAAATTCCTCTTCAGATCTGTGTCTTCTCTCCAGGGACATATGACCTGTCAAATTATGTTTTGAGTTGGAAACTTCCATCCCAAGTTCTGGGAGACAGTGATGAAACCAAGCAGCATTCGGGCAAGTGCCAGGGCTATAAATACTATTTGACTGTGCTTCAGTCCACTTGA 3867 0.4037 MDPARTPLGQMLLEEITPVVMVLSTPSVEETCLKNGFSFLQMLTPFCSFNNIDVPVRTASDQPYRIHKFKLRLFYGSNVRKPDLKVAEEQLMQVITESGEKVFSELCSDAPKINQEHASSEDRNTPSWFQFFNKELVRMASFSDHEAFDHPVACLLAVSSKDEHPVSRFIDLFNTNKLPSLLKDGAMDPKILKHYLLVHDNQDGSADRASKILTEMRNTFGASDCVLLSINSSPDAPIKHQDNPWASQICDASPDQDLGCFLNIDDINEIKDLMQDLSSKHIIPNMEQKIRVLNQQVSATRKGFKNQIKNLWWRKGKEDGVDSLNGPMYNFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLKLGFVGQQNATRCGLWWIEMLKARDLFKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMSRKYGFHLVLSGEQYKKCDQIKHAIRTYRSALSVFRGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMTEILACSHQSKTTQELFLGDFLQVVEKTGHTFEVTKLQLPVINISSLKVIFEDHRTFGSPSAVNTKEGLWHSLEEDMIPSFTAAKTNWLELQSKLISKKNTQSNVCVAGEAVKVNIEFINPLQITIPVSGVTLVCKYSTSTDELTSNANELSVKTDNEVDHFRDTSSHNSSFLVSEVDFSLGGGETTMVQLSVTPKEVGTLEILGVRWKLSGAIVGFHNFELSHPKKNIVKGRRKAKQSPNEKFKFMVIKSIPKIQGTIQSLPGKAYAGDLRQLMLELRNPSEFPVKNLKMKISHPRFLIVGNQENVKLEFPGCLTKKSDSVQSGAHANPNMMSETVFSFPADTSVQGETPLSWPLWFRAAVPGDISLYMSIYYEIEDISSVIRYRTLRLHYNVQVLPSLDVSFQISPSRLRIQDFLVRLDIVNKTSSESFQVYQLSSIGHHWEISLLQPPEAIFPSQTLMAGQAISCFFTLKNSRRLSTLEHNISTLPLGSDVLLVPQCSEDLVYNTNNVPLVNFHYFERLQQKVLHEDLGDLNTVDLVLISRPLNSSISPGLSDPPHVMSHHTCHLSTASTGPISWLVDGPQTLHHDFSASFCEINLKMHLYNSSDATAFVRIDTTDFDGSGGHMNSVNAIQSATPDNQAGWHDVTPVTEIKVTPNALEAQPGKVVLLESVSPYIWSGSSSTNIHLEPMSSAEIPLQICVFSPGTYDLSNYVLSWKLPSQVLGDSDETKQHSGKCQGYKYYLTVLQST* 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0662 1288 SUPERFAMILY TPR-like 427 550 IPR011990 GO:0005515
Tpr6g0662 1288 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 187 518 IPR024420 -
Tpr6g0662 1288 Gene3D Tetratricopeptide repeat domain 331 554 IPR011990 GO:0005515
Tpr6g0662 1288 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 636 829 IPR013935 -
Tpr6g0662 1288 PANTHER TRANSPORT PROTEIN TRAPP 8 1287 IPR024420 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0662 K20305 - gmx:100809666 2189.46