Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0648 ATGGAATATCCCAATTCCATCTATGGTCTCTTCTTCATCCTTTTCCTAATCCCAATCCATTCCGCATTCACTCACAATTCAACCTCAACCGTTCAGATCAACTCCAACTCCATCCTCGTTGCGCTTCTGGATTCTCATTACACCGAACTCGCGGAACTCGTTGAGAAAGCTCTTCTCCTTCAGAAACTTGAAGAAGCTGTTGGTAATCACAACATCACAATCTTCGCTCCAAGAAATCAAGCTCTTGAACGTGACCTAGATCCTGAATTCAAAAGATTTCTTCTCGAACCACGGAATCTGAAGTCTCTTCAAATGCTTTTGATGTCTCACATTCTTCCTTCAAGAATCGCTTCTCATCACTGGCCGGAAAATAGTCTCCGTCATCAGACACTCTCCAACCACCGTCTCCATTTAACAACAAACCCTTCCGGTAAGAAATCTGTTGATTCCGCTGAGATCCTCCGCGCCGACGATGTTCTCCGTCCCGACGGTGTCATCCACGGTATCGAACGTCTCATTGTACCTCGCTCCGTACAGGAAGATTTCAACCGGAGAAGAAATCTTCGTGATATATCAGCGATTCTCCCGGAAGGAGCACCGGAGGTAGATCCAAGAACAAACCGGCTAAAAAAACCAGCACCAGTCCCTGCCGGAGCTCCACCGGTGTTACCAATCTACGATGCTTTAGCACCAGGTCCTTCTCTAGCTCCGGCACCGGCACCAGGACCGGGAGGACCACGTCATCACTTTAACGGAGAACGTCAAGTGAAGGATTTCATTCAAACTCTTCTTCATTACGGTGGTTACAATGAAATGGCGGATATTCTTGTAAACCTAACGTCGCTTGCAACGGAAATGGGTCGTTTAGTTTCTGAAGGTTATGTTCTAACCGTTTTGGCTCCAAATGACGAAGCAATGGCGAAGTTAACGACCGATCAATTGAGTGAACCAGGTGCACCGGAACAGATCATATATTATCATATAATTCCAGAGTATCAAACGGAGGAGAGTATGTATAACGCTGTTAGGAGATTTGGGAAAATTAGTTACGATACACTCCGTTTGCCTCATAAGGTTGTTGCTCAGGAATCTGACGGTTCCGTTAAATTTGGTCACGGTGATTCTTCTGCTTATTTGTTTGATCCTGATATTTACACCGACGGGAGAATTTCCGTTCAGGGTATTGACGGTGTTCTTTTACCACCGGAGGAAGAGAATGAAGATGAATCAGCCTCAATTAGCCGTGCAAAAATTCCACTTGTTAAAGTTGCTACTAAACCAAGGAGAGGGAAGTTGCTGGAACTCGCATGTAGCATGGTTGGAGTCTGCTCATGA 1335 0.4554 MEYPNSIYGLFFILFLIPIHSAFTHNSTSTVQINSNSILVALLDSHYTELAELVEKALLLQKLEEAVGNHNITIFAPRNQALERDLDPEFKRFLLEPRNLKSLQMLLMSHILPSRIASHHWPENSLRHQTLSNHRLHLTTNPSGKKSVDSAEILRADDVLRPDGVIHGIERLIVPRSVQEDFNRRRNLRDISAILPEGAPEVDPRTNRLKKPAPVPAGAPPVLPIYDALAPGPSLAPAPAPGPGGPRHHFNGERQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKISYDTLRLPHKVVAQESDGSVKFGHGDSSAYLFDPDIYTDGRISVQGIDGVLLPPEEENEDESASISRAKIPLVKVATKPRRGKLLELACSMVGVCS* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0648 444 Gene3D FAS1 domain 38 175 IPR036378 -
Tpr6g0648 444 SMART fasc_3 297 402 IPR000782 -
Tpr6g0648 444 SMART fasc_3 73 176 IPR000782 -
Tpr6g0648 444 SUPERFAMILY FAS1 domain 235 403 IPR036378 -
Tpr6g0648 444 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 10 442 IPR044654 -
Tpr6g0648 444 Gene3D FAS1 domain 275 402 IPR036378 -
Tpr6g0648 444 ProSiteProfiles FAS1/BIgH3 domain profile. 34 173 IPR000782 -
Tpr6g0648 444 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 10 442 - -
Tpr6g0648 444 SUPERFAMILY FAS1 domain 31 176 IPR036378 -
Tpr6g0648 444 ProSiteProfiles FAS1/BIgH3 domain profile. 256 399 IPR000782 -
Tpr6g0648 444 Pfam Fasciclin domain 46 175 IPR000782 -
Tpr6g0648 444 Pfam Fasciclin domain 281 401 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0648 Tpr-Chr6 5263758 5266795 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0648 - - gmx:100818575 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0648 6 5263758 5266795 Tpr6g0648 6 5263758 5266795 ECH