Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0631 ATGGTGAAAACAAATAAGAAGAGCACAGGAAAATCTCCTGGTAAAGGTTGCCTTGTCGATTCTCCAGCTTGTGATAATCAGCATGAGGATAGTGATTGGATTATAGTTAAAAAGCAGAGAGTCATCATTCTGGTTCCTGCACCTGAAAGATCCTCAACAGAAAATGAAGAGCCGAATCACAAGCATCCTATGCCTCCTGTAACGTCAAGTAACCATGAGGAACTTCCCGAGGAGACACCTAATGAAAATCCTTCTTGTAGTGAACAAGAGAAGACCATTTCATTGGCTGTCCAAAAGGAGATTCGTACTGTGAGAAGAGCTCCTCCTCCCTTATTACTGGAATCACCTTCAGTCAATCTACCACAGGTAGATCAAAGAATAGAATCAGAAAATCCGCATCAACTGAGTAGTAGTTTGAAGTCCCAAAGATTAGTTGGAGTATCGAATACATCAAATTTTATAAAGCAGCCAAGAACATTACTTGCTCCAAAAAGGTTCTCCAACTTGGCAACTTTGAATCAAGGTCTGAGAGCATCAAATCTCCAGAGAAAGCTTGAAAGAGCTGGTGGGTTGAACAAGTGGCTGGCATCACTTGGACTGGAGCAGTTTGTGAGAATGTTTCAAGGAAAAATTATAAGTAAGTATCAGCTTGTGAATCTAACCATGAAAAAACTCAAGGATATGGGTGCCAGTGCGGTGGGACCTCGCAGGAAACTAATCCATGCCATGGACTGTGTTTGCCAGCCATATTGCTTTGAGGCGTTATAG 768 0.4193 MVKTNKKSTGKSPGKGCLVDSPACDNQHEDSDWIIVKKQRVIILVPAPERSSTENEEPNHKHPMPPVTSSNHEELPEETPNENPSCSEQEKTISLAVQKEIRTVRRAPPPLLLESPSVNLPQVDQRIESENPHQLSSSLKSQRLVGVSNTSNFIKQPRTLLAPKRFSNLATLNQGLRASNLQRKLERAGGLNKWLASLGLEQFVRMFQGKIISKYQLVNLTMKKLKDMGASAVGPRRKLIHAMDCVCQPYCFEAL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0631 255 SUPERFAMILY SAM/Pointed domain 190 248 IPR013761 -
Tpr6g0631 255 Pfam SAM domain (Sterile alpha motif) 191 245 IPR001660 GO:0005515
Tpr6g0631 255 PANTHER SCP160 22 254 - -
Tpr6g0631 255 SMART SAM_4 183 249 IPR001660 GO:0005515
Tpr6g0631 255 MobiDBLite consensus disorder prediction 46 90 - -
Tpr6g0631 255 MobiDBLite consensus disorder prediction 1 31 - -
Tpr6g0631 255 ProSiteProfiles SAM domain profile. 191 249 IPR001660 GO:0005515
Tpr6g0631 255 Gene3D - 186 244 IPR013761 -
Tpr6g0631 255 PANTHER F26K24.15 PROTEIN-RELATED 22 254 - -
Tpr6g0631 255 CDD SAM_superfamily 191 242 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0631 - - gmx:100804141 335.495