Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0629 ATGACAACAAAACCAACCAATCTCTTAACAACAAAACCTTCACCATTAACAACAATGGTAACACTCTTAATCCTATGCATTCTTTCTTTCTACGCTTTTCATTTCCCACACTCTCTTCTTTCATCTTCAACCAAACCCTCCACAATACAAAATCTCTTTCTCTCTTCTTCTTCCAACTCAACCATATCTTCTTACCTCCGCACCCTCACCATGCACCCTCACCTCGCCGGAACAAAACCCAATTCCGACACAGCACTTTTCCTTCTCAAACACTTCACTTCCTTAAACCTCAAAACCCACACAACATCATACAAAACACTTCTTTCCTACCCATTACACTCTTCTCTCTCTTCTCATTTCAAAAACGGTTCTTTCATTAATCTCCCTTTAACTGAACCATCTGAACCCGGTTCAGACATGGTTCATGCCTACCACGCCTATTCACCTTCCGGTTCAGTTTATTCTAAACCGGTTTTCGTTAACTATGGTAGAGATAAAGACTATCGTGCGCTTGGTTCACTTGGTGTTAACGTTAAGGGATGTATAGTGATAGTGAGAAAAGGTGGTGGTTTAGGGAGGAATACGGTGGTTGAAAAGGCTGAGAAAAATGGGGCTGCGGCGGTTTTAATTTACAACGATGAAGTTGACACGTGGCGTAATGGGTTTGAGAGAGGTCACGTGATGAAAGGTGTGGGGGACCCATTGAGTCCTGGTTGGGGTAGTGTTGATGGTAGTGAGAGGTTAAGTTTGGATGATAATGAAGTTTTGGAAAGGTTCCCTAAAATTCCTTCTATGCCAATTTCTGTTGATGCTGCTGATGCTGTTTTGTCTTCACTTGGTGAATCTATGGTGCCCTTAGAATGGAGGAGTACCCTGAAAATTAAGGGTATTACACATGTTGGTCCTGGTCCCACTATGCTTAATTTCACCTACCTGGGTGAAAAGAAGTTGGCAACCATTCAGAATGTTTTTGCTGTCATAAAAGGATCAGAAGAACCCGATCGCCATGTTCTGCTCGGGAACCATAGAGATGCATGGACTTATGGTGCTGTTGATCCCAGCAGTGGGACAGCTGCCCTACTTGACCTAGCTCGGCGATACTCTATTCTACTGGCTTCAGGATGGAAGCCTAGGAGAACAATCGTTCTCTGCAGTTGGGATGCCGAGGAATTTGGCATGATAGGATCCACTGAATGGGTTGAACAGAACCTGATCAATTTGGGTTCCAAAGCTGTAGCGTACCTTAATGTCGATTGTGCTGTTCAAGGCCCTGGTTTCTTTGTTGGCTCAACTCCTCAGCTAGACAGTCTTATTCACGATGTCACGAAAAAGGTCAATGATCCCGACTCTGAGGGTGTATCAGTATACGAGACTTGGGCTGCGGCTGATGGAGGAAATAATATTCAAAGGCTCGGTAGAGTTGATTCTGATTTCGCTCCATTTGTACAACATGCAGGGGTTCCATCGATTGATATCTATTACGGAAAAGATTTTCCTGTCTATCACACTGCTTTCGACTCCTATAACTGGATGGCAGAGTATGGAGATCCATTCTTCAAGCGCCATGTTGCTGCTACTGGAATTTGGGGCCTTTTAGCCCTTCGTCTGGCTGATGATCCCGTTCTTCCTTTCGATTACTTATCATATGCAAATGAGTTAAGGTTGTACAGGGACAAATTGAGCAGCATGTTAGACCATAAAATTTCTCTGCATCCGTTAACCACGTCAATAGAAGAATTTGCTTCTGCTGCCAAAGAAGTTGACAATGAACTAAAGGAACTTAGATTGCTAGAAACCGCAGATCAGTTTGTTGAAATGAAAAGGCGAGCGATGAATGATAGACTGATGCTTGCAGAAAAGGGCTTCCTAGATGGAGATGGACTTAAAGGAAAACAGTGGTTCAAGCATCTTGTGTTTGGGCCTCTGAACGACGCTGAGAAGTTGGATTTTTTCCCTGGGATCGCTGATTCTATGACTAGGACGTCAACTGGCGCAATCAAAAAAGAAAGGCTAGCAGATATTCAACATGAGATCTGGAGGGTTACCAGAGCCGTTCAAAGAGCTACTTCTGCACTGAGAGGAGAATTCACCTAG 2094 0.4379 MTTKPTNLLTTKPSPLTTMVTLLILCILSFYAFHFPHSLLSSSTKPSTIQNLFLSSSSNSTISSYLRTLTMHPHLAGTKPNSDTALFLLKHFTSLNLKTHTTSYKTLLSYPLHSSLSSHFKNGSFINLPLTEPSEPGSDMVHAYHAYSPSGSVYSKPVFVNYGRDKDYRALGSLGVNVKGCIVIVRKGGGLGRNTVVEKAEKNGAAAVLIYNDEVDTWRNGFERGHVMKGVGDPLSPGWGSVDGSERLSLDDNEVLERFPKIPSMPISVDAADAVLSSLGESMVPLEWRSTLKIKGITHVGPGPTMLNFTYLGEKKLATIQNVFAVIKGSEEPDRHVLLGNHRDAWTYGAVDPSSGTAALLDLARRYSILLASGWKPRRTIVLCSWDAEEFGMIGSTEWVEQNLINLGSKAVAYLNVDCAVQGPGFFVGSTPQLDSLIHDVTKKVNDPDSEGVSVYETWAAADGGNNIQRLGRVDSDFAPFVQHAGVPSIDIYYGKDFPVYHTAFDSYNWMAEYGDPFFKRHVAATGIWGLLALRLADDPVLPFDYLSYANELRLYRDKLSSMLDHKISLHPLTTSIEEFASAAKEVDNELKELRLLETADQFVEMKRRAMNDRLMLAEKGFLDGDGLKGKQWFKHLVFGPLNDAEKLDFFPGIADSMTRTSTGAIKKERLADIQHEIWRVTRAVQRATSALRGEFT* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0629 697 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 18 695 IPR039373 -
Tpr6g0629 697 SUPERFAMILY PA domain 107 324 IPR046450 -
Tpr6g0629 697 Pfam PA domain 159 215 IPR003137 -
Tpr6g0629 697 Gene3D - 114 313 - -
Tpr6g0629 697 SUPERFAMILY Transferrin receptor-like dimerisation domain 543 695 IPR036757 -
Tpr6g0629 697 Gene3D Zn peptidases 60 543 - -
Tpr6g0629 697 Pfam Peptidase family M28 322 509 IPR007484 -
Tpr6g0629 697 Coils Coil 577 597 - -
Tpr6g0629 697 CDD M28_PSMA_like 318 544 - -
Tpr6g0629 697 Gene3D - 546 697 IPR036757 -
Tpr6g0629 697 SUPERFAMILY Zn-dependent exopeptidases 58 542 - -
Tpr6g0629 697 Pfam Transferrin receptor-like dimerisation domain 568 692 IPR007365 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0629 K01301 - gmx:100818733 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0629 6 5117945 5123359 Tpr6g0629 6 5117945 5123359 ECH