Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0597 ATGGAAGGTTCAGCAGTGTGGCAAGGTGCGGTTCTGGGTGGAATACTCTTGTGGCTTTTTTCTTCTTCATATCTCAATTTAACTCTAAAGCTTAGATCTTTTCTTCAACCTTTCGTCATTCACTATGTTCAAACTGGAACCCCAATTCTCCTTAAGATCCAGAGTTACAGGGTTGGATTTCTTGATGCTCTTTTTTCTGTGTTGTCTTGTGTTGTTTCTGTGCCATTTTACACTGCTTTTCTCCCTTTGTTATTCTGGAGTGGTCATGGTCAATTGGCTAGGCAGATGACGTTGTTGATGGCGTTTTGTGATTATATAGGGAATTGTATAAAGGATGTGGTTTCAGCACCAAGACCTGCTTCTCCACCTGTGAGGAGAGTAACTGCTACAAAAGATGAAGAAGAGAATGCTTTAGAATATGGACTTCCTTCTTCTCACACACTTAATACAGTTTGCTTATCAGGCTACCTTTTGCACTATGTCCTGACTCATACTCAAATTCAAGGTGCCTATATTAATTATTTTGGAGTTTCGCTTGCTTGCTTGTTCGTGGCCCTCGTTGGTTTGGGAAGAATTTATCTTGGCATGCACAGTTTGATTGATGTTGTTGCTGGCCTTTTTATTGGACTCGGAATCCTTGGTCTTTGGCTTACAGTATATGAATGCATTGACAATTTTGTGGTCTCAGGACAAAACGTTACAACTTTTTGGGCTGCTTTGAGCTTCCTCCTGCTTTTTGCTTATCCAACTCCTGAACTACCAACTCCAAGTTTTGAGTTTCATACTGCTTTCGATGGTGTTGCATTGGGAATTGTGTCTGGGGTACAGCAAACATACCACCAATTTCACCATGACAATGTTCCTCGTTTGTTCTCTTCAGAAATGACAATACCAGTATTCATGGGAAGAATGCTCGTGGGAATACCTACTATTCTAATTGTGAAATTCTGCAGTAAGACTCTTGCAAAATGGACTATTCCTGTGGTTGCAAACACATTAGGCATCCCAATAAAATCAACCACCTATATCCCCACATTGAATGGTGCTAAGACGGGAGAAAAGTCAAAGGCTTTCGATGTTGATACCGGAATTAGGTTTCTACAATACGCAGGTCTAGCGTGGTCTGTGGTCGACCTAGTGCCATCTATTTTTTCATACGTGAGCCTGTGA 1170 0.412 MEGSAVWQGAVLGGILLWLFSSSYLNLTLKLRSFLQPFVIHYVQTGTPILLKIQSYRVGFLDALFSVLSCVVSVPFYTAFLPLLFWSGHGQLARQMTLLMAFCDYIGNCIKDVVSAPRPASPPVRRVTATKDEEENALEYGLPSSHTLNTVCLSGYLLHYVLTHTQIQGAYINYFGVSLACLFVALVGLGRIYLGMHSLIDVVAGLFIGLGILGLWLTVYECIDNFVVSGQNVTTFWAALSFLLLFAYPTPELPTPSFEFHTAFDGVALGIVSGVQQTYHQFHHDNVPRLFSSEMTIPVFMGRMLVGIPTILIVKFCSKTLAKWTIPVVANTLGIPIKSTTYIPTLNGAKTGEKSKAFDVDTGIRFLQYAGLAWSVVDLVPSIFSYVSL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0597 389 SMART acid_phosph_2 93 217 IPR000326 -
Tpr6g0597 389 PANTHER PHOSPHATIDIC ACID PHOSPHATASE TYPE 2/HALOPEROXIDASE-RELATED 6 346 - -
Tpr6g0597 389 PANTHER PHOSPHATIDIC ACID PHOSPHATASE TYPE 2/HALOPEROXIDASE-RELATED 354 388 - -
Tpr6g0597 389 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 124 235 - -
Tpr6g0597 389 CDD PAP2_SPPase1 60 217 - -
Tpr6g0597 389 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 23 221 IPR036938 -
Tpr6g0597 389 Pfam PAP2 superfamily 96 219 IPR000326 -
Tpr6g0597 389 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 354 388 - -
Tpr6g0597 389 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 6 346 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0597 - - gmx:100778490 642.114