Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0590 ATGATGCTAAGAATCCGAAGCCGCGATGGTCTAGAACGAGTAAAAATCGATAACCCAAACACAACAACAGTTTCAGAACTGAAATCAATCATCGAAAAACAATTACGTATTCCAACACATAACCAAACCCTATCAATTAACCAAAACCTTTTACTAGCTAAATCACAACAAGATCTTCTTCGATTCACCGATATGTCAAACCCTAACACTCCTTTAACAGCGTTAAACCTTTCTCACGGTTCAATTCTCTTTCTAGCTTACGAAGGTGAACGTAACGTTCCCGGTCCAACCGCTTTTAGTCCTGCCGGTTCATTCGGTCGAAAGATGACTATGGATGATCTTATCGCTAAACAGATGCGTGTTTCTAGACAAGAGAATCCGCATTGTGAATTGGTTTCATTCGATCGCGATTGCGCCAATGCGTTTCAACATTATGTTAATGAAACCCTTGCTTTTGCTGTTAAAAGAGGTGGGTTTATGTATGGGACTGTTTCTGAGGTTGGTAAGGTTGAGGTTGATTTTATATACGAACCGCCACAACAAGGTTCGGAGGAGAATCTCGTGTTTTTTAGGGATCCGGAGGAAGAGAAATATGTGGAAGCGATTGCGGTTGGGTTAGGAATGAGAAGGGTTGGGTTTATTTTTACTCAGACTGTGAGTCAGGATAAAAAGGATTATACTTTATCTTATAGGGAAGTGCTTCAGGCTGCTGAGTATCATGCTGAGAGTGGATTGAAGGAATGGGTTACCGCGGTTGTGAAGCTTGAGGTGAGTGAGGAAATGGGTGGTGCTGATGTTCATTTTGAAGCTTTTCAGATGAGTGATGTGTGTATTAGGTTGTTTAAGGAAGGTTGGTTTGATACTGAGATTAAGGAAGATCATGATCCTAAGTTGTCTATTATGAAAAAGGATGTTGTTGTTGGCGTTAAGGATACTAAAGAGGTTGATAATGATTTCTTCTTGGTTGTTGTCAAAATCTCTGATCATCAGGGACCTCTTTCATCAGCATTTCCCGTTGAGAACCGGAATACTCAAGTGACCGCGCAGGCGCTGAAGAATCATCTTGAACGGACTAAAAATCTTCCATTTGTGAAGCGAATTTCAGATTTTCATCTCCTCCTTGTATTATCGAGGGTGTTGGACGTGTCTGCTGATGTTCCTGCATTGACAGAATGTGTGCAGACACAAAGTGCCGTACCAGAAGGTTACCAGATCCTTATTGAGTCCATGGCTAGCGCTGCTTGA 1245 0.4169 MMLRIRSRDGLERVKIDNPNTTTVSELKSIIEKQLRIPTHNQTLSINQNLLLAKSQQDLLRFTDMSNPNTPLTALNLSHGSILFLAYEGERNVPGPTAFSPAGSFGRKMTMDDLIAKQMRVSRQENPHCELVSFDRDCANAFQHYVNETLAFAVKRGGFMYGTVSEVGKVEVDFIYEPPQQGSEENLVFFRDPEEEKYVEAIAVGLGMRRVGFIFTQTVSQDKKDYTLSYREVLQAAEYHAESGLKEWVTAVVKLEVSEEMGGADVHFEAFQMSDVCIRLFKEGWFDTEIKEDHDPKLSIMKKDVVVGVKDTKEVDNDFFLVVVKISDHQGPLSSAFPVENRNTQVTAQALKNHLERTKNLPFVKRISDFHLLLVLSRVLDVSADVPALTECVQTQSAVPEGYQILIESMASAA* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0590 414 CDD MPN_NPL4 120 376 IPR007717 -
Tpr6g0590 414 Pfam NPL4 family 158 240 IPR007717 -
Tpr6g0590 414 SUPERFAMILY Ubiquitin-like 1 90 IPR029071 -
Tpr6g0590 414 ProSiteProfiles MPN domain profile. 131 277 IPR037518 -
Tpr6g0590 414 ProSiteProfiles Ubiquitin domain profile. 1 51 IPR000626 GO:0005515
Tpr6g0590 414 CDD Ubl_AtNPL4_like 1 85 - -
Tpr6g0590 414 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 103 411 IPR016563 GO:0006511
Tpr6g0590 414 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 2 92 IPR016563 GO:0006511
Tpr6g0590 414 Pfam Nuclear pore localisation protein NPL4 1 85 IPR024682 -
Tpr6g0590 414 Gene3D - 1 101 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0590 K14015 - gmx:100779549 713.375