Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0583 ATGGCGAACACTCAACCTTCATCTTCACCTGCTGGAGATGAAGTTAGAGATGCAAATGGAAATGAACATTATCAGGAAACTGAGCTTTTTGAGGACACATTAGTGATCCATAGTCCCTTAATCGAAACTGAAGTGCAAAATCTCGATCTGAATACTGAGGTGCAAAATATTGATCTGAATGCCGAGGTGCAAAATCTCGATCTGAATGCTGAGTTAGTAGAGGATTCGGAGCCTGTAGAGGACATGATAACTGCTACAACATGTGAGTATGAGCAAGAAGTGGTGCTTGACAGTGAGGACGAAGAAATGAATAATGCAGACAAAGTGACTGTTGCTGAAAGATTTCTTGAGGATGGAAGTAGTCCAGTAGTGAACAATTCTTTAGTGCTCTTCAAGAAGAAATTGCCTAAGCTACCTTGTGAGGAAGCAAACTCAAAATCAAATGCCGCTACTTCTGGGAAATCTGGAACTGGGGACGAAAGAGCTTCAGTTGATGCTAAGAGCTTTGATGACAACAAACATCAATCTCTGCATGATAGGTTATATGATGTTCGCTCACCAGAGCCTGGGGATTCAACCGTAGCTGCACTAGGCTTCGTGGATCAGTACTTGTCGTCAATAGATGTGGACCTGTTTCAAGGAGTTCAAAATGGAAATATTGCTAGGGAAAAATCGCCTCGTGTCTCGAGTGCAAGAGGATCAATTAGTTTGGCTAAGAAATTTAAAGCTCGAAATCAAAATGAAGATAAAGACCCTTTCGAGTGGGATGACAGTGTTCAAAATGAAAAAGAAGCTGGTATTTTCGGTAAAAAGCTTGAAGCATCTTTCAATATTGGACGCCATGGACTGGCATATAAGAGAAGACAGAAAAAAGGTAGTCATCCTCCAAACCAAGGAAAATCTAGTGCAAGTAATAGATGTGATGAGAATTTAGTGCAAGAACCAAGAATGGAAGCTGACAACAATAACTATCTCAAGGAGTTGGATGTTGATTTGTGTGCCACAAGAGAGAATGTCGATATTTATTCTAGTGTAGCACGTACAGAAGACGTGTATGATATTGGCTTAGACACTCAAATAGCTGCTGAAGCTATGGATGCCTTAGCAAATATGTCCCCTGCTGGCTTTCATTTAAGTGATGCTCGCCAACAAGAGAACGCATTTGATGCATCTTTGAGTGATTTCAATCAACCTCATCAGAAAAATTCTCCATCTAAAGAGAATCCTGGTTCACATTCTATTGCTCTAAAATCATACAAGGGAAATGTATCTTCTCGTAGATTTGGCAAAGTAACTTCTAGTTCCTCTTGCAAGGACACTAACAATCAGGAAACAAAGCCTGTCTCAGGGAAAATGAAAAAAACAATGGGAAGCAAGTCAACTGTTGAGGTGCAGTTCAAAAATAATGTTAGTCCATCAATATGCAATGAACATGTATCACATGAAGAGGTTTGTTTACTAGGAGAAGATAGGAGTTTTCAATCTGCTTCCAAAGAACCCAAAATCCAGAATAAGAGCAAATGGACAAGAGTGAAATGTCAACCAAGTCATCCTAGAGAGAGTAACAATAATGTTGAGAAGGATACTATTAGATATAAGAGGAAGGGAAATTGTTTAGTGGCAGATCCAGTGAAGATGGATGTTAAGACGAAACGTCTTAATTCATCTATTAGTTCATATGGTGTGGCTAGGAAGTGCAGTTTGAAACATCAGGTTGAAGTTAGTCCACAACTATCCGCAACCAGCTGTTTTTCAATGATTGATTCTTGGGCTTATCCAAAAGGACCAAGGGGGAAAAGAAAGCGAGCTAATGCCCCGAGATTTTTATGTATTGATGATAAAGAAAACAATGTCTATTCCACCAAAATTCTAGAGGGTCGAGATGTTGTGCATAAATCATGTCTTCCCCCAGTTTCGGCAGGTGGTGCTATAAAATTTGAAAACCTACATGATAAGCAACCCTTGTTGCTAGCACATGTTGAAATATTATCAAACAAGACTGTTGTACATTCGAGTTCAGAAATTTCAGCTTCTGTTGTTCCAATTGAAGGCATAAAAATTTCAAATGCTACCCATACAAGCAATGAACACTGCAAAAAGGCATGTGACAAAAACCTGCCAAAGTCTTCACTTTTGAAGGAACTTATCAGATTAGGAGTTCCCAAATCCACATCAGAAATAATGAGTATAGATCCAAGACATCGAAGAGATATGACAAATGTGCGAGTTCTGTTTAGCCAACATTTGGATGACAGTGTCCTCAAGCAACAACAGAAGATCTTGACACGTCTTAATATATCTACTGCATCAAGCTCAAAGGAGGCCACTCATTTCATAGCCGACAAGTTTACACGTACAAAGAATATGCTGGAAACAATGGCTCTTGGGAACTTAGTATTGACACACTTATGGCTTGAGAGTTGTGGACAAGCCAACTGTTTTATTGACGAGAAAAATTATATTTTGAGGGATATGAAAAAGGAAAAGGAAATAGGCTTTAGCATGCCAGTTTCTCTTGCTCGAGCAAGACAAAAGCCACTCCTGAAGGGTAAACGAGTCTACATAACACCACACATCAAACCTAATAAGGAAGTGGTTGCGAGCTTGGTTACAGCTGTTCATGGCCAGCTAGTGGATGAAAATCAGATATTTGCAGACAAGAATGATAATGTCTTGGATGATCTATTGATTCTTTCTTGTGAAGAAGACTTTGCAATATGCCGCCATTTCCTTAAGAGAGGAGCTGCTGTTTACAGTTCAGAGCTTGTTCTGAATGGAATTGTAATCCAGAAATTAGAACTCGAGAGGCATAAACTGTTCGTGAATCAAGTTACAAAGAATAAACTAGGTAGATGTAATTGGTTTGGGAAGGTTTACAGAAGGCGTCTGATGCCTTTATCTTGA 2904 0.3939 MANTQPSSSPAGDEVRDANGNEHYQETELFEDTLVIHSPLIETEVQNLDLNTEVQNIDLNAEVQNLDLNAELVEDSEPVEDMITATTCEYEQEVVLDSEDEEMNNADKVTVAERFLEDGSSPVVNNSLVLFKKKLPKLPCEEANSKSNAATSGKSGTGDERASVDAKSFDDNKHQSLHDRLYDVRSPEPGDSTVAALGFVDQYLSSIDVDLFQGVQNGNIAREKSPRVSSARGSISLAKKFKARNQNEDKDPFEWDDSVQNEKEAGIFGKKLEASFNIGRHGLAYKRRQKKGSHPPNQGKSSASNRCDENLVQEPRMEADNNNYLKELDVDLCATRENVDIYSSVARTEDVYDIGLDTQIAAEAMDALANMSPAGFHLSDARQQENAFDASLSDFNQPHQKNSPSKENPGSHSIALKSYKGNVSSRRFGKVTSSSSCKDTNNQETKPVSGKMKKTMGSKSTVEVQFKNNVSPSICNEHVSHEEVCLLGEDRSFQSASKEPKIQNKSKWTRVKCQPSHPRESNNNVEKDTIRYKRKGNCLVADPVKMDVKTKRLNSSISSYGVARKCSLKHQVEVSPQLSATSCFSMIDSWAYPKGPRGKRKRANAPRFLCIDDKENNVYSTKILEGRDVVHKSCLPPVSAGGAIKFENLHDKQPLLLAHVEILSNKTVVHSSSEISASVVPIEGIKISNATHTSNEHCKKACDKNLPKSSLLKELIRLGVPKSTSEIMSIDPRHRRDMTNVRVLFSQHLDDSVLKQQQKILTRLNISTASSSKEATHFIADKFTRTKNMLETMALGNLVLTHLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPVSLARARQKPLLKGKRVYITPHIKPNKEVVASLVTAVHGQLVDENQIFADKNDNVLDDLLILSCEEDFAICRHFLKRGAAVYSSELVLNGIVIQKLELERHKLFVNQVTKNKLGRCNWFGKVYRRRLMPLS* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0583 967 MobiDBLite consensus disorder prediction 496 523 - -
Tpr6g0583 967 CDD BRCT_MDC1_rpt1 741 815 - -
Tpr6g0583 967 MobiDBLite consensus disorder prediction 1 20 - -
Tpr6g0583 967 MobiDBLite consensus disorder prediction 497 520 - -
Tpr6g0583 967 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 734 822 IPR001357 -
Tpr6g0583 967 MobiDBLite consensus disorder prediction 144 158 - -
Tpr6g0583 967 Gene3D BRCT domain 846 947 IPR036420 -
Tpr6g0583 967 CDD BRCT_PAXIP1_rpt6_like 847 933 - -
Tpr6g0583 967 Gene3D BRCT domain 730 845 IPR036420 -
Tpr6g0583 967 ProSiteProfiles BRCT domain profile. 733 822 IPR001357 -
Tpr6g0583 967 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 61 947 - -
Tpr6g0583 967 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 61 947 - -
Tpr6g0583 967 MobiDBLite consensus disorder prediction 286 308 - -
Tpr6g0583 967 MobiDBLite consensus disorder prediction 425 457 - -
Tpr6g0583 967 MobiDBLite consensus disorder prediction 141 167 - -
Tpr6g0583 967 SUPERFAMILY BRCT domain 728 838 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0583 Tpr-Chr6 4777153 4781847 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0583 - K20780 gmx:102659913 1081.24