Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0579 ATGCCGGAAGCACCGGTGATCATCATCGGAGCTGGAACTTCCGGCATAGCCACCGCAGCTTGTTTAACCAAAAAATCCATACCATACATAATTCTCGAAAGAGAAAACTGTTTTGCATCTCTATGGCAAAAATACACATACGATCGTGTTCATCTTCACCTAAGAAAACAACTTTGTGAATTACCACACTTTCCATTTCCACCTTCTTATCCTCACTATGTGCCCAAAAAACAGTTCATAGATTATTTAGACAATTATGTCAAAAACTTCAACATTAGTCCTTTGTATAACAGAGCTGTTGAGTTAGCAGAGTATCTTGATGATGATGATGATGATGAGAAATGGAAAGTTAAAGCTAAGAATAAAGATTCTGGTGAAGTTGAGGATTATTATGGAAAGTTCTTGGTTGTTGCTAGTGGCGAAACCGCTGAACCTCGTGTACCCGAGGTTCAAGGGTTAGAAGGGTTTAAAGGGAGAGTGATTCATTCAACTGGTTATAAAAATGGGATAGATTTTAAAGATCAACATGTTCTTGTTGTTGGTTCTGGTAATTCTGGTATGGAAATTGCTTTAGATTTGGCTAATTTTGGTGCTAAACCTTCAATTATTGTCAGAAGTCCGGTTCATTTTCTTTCTAAGGATATGATGTACTATGCTGGGGTTTTATTGAACTATCTGTCACTAAGTACAGTGGAGAAACTGGTGGTGATAGTTAGCAGGATTGTGTACGGGGATCTGAGCAAATATGGTATACCCTTTCCTAGTGAGGGACCTTTCACCATGAAGATGAAGTATGGAAAGTTTCCAGTAATTGATCTGGGAACTGTTAAGAAAATCAAATCTGGAGAGATACAGGTGTTGCCGGCTGAAATAGAGAGCATAAAAGGTAACCAAATGTTGTTCCGTGATGGAAAATCCTATCCATTTGACTCCATTATTTTCTGCACAGGCTTCAAGAGATCAACTCAAAAATGGCTTAAGGGAGGTGATGATCTTTTGAATGAGGATGGTTTTGCAAAGGGTGGTTTATGGAAGGGTAAGAATGGTTTGTACTGCGTTGGATTGTCAAGGAGGGGATTTTATGGAGCTAATCTCGAGGCTCAAAATGTAGCAAATGATATTGCCTCCTTGGTTGGTTCCTCAACATGA 1149 0.3908 MPEAPVIIIGAGTSGIATAACLTKKSIPYIILERENCFASLWQKYTYDRVHLHLRKQLCELPHFPFPPSYPHYVPKKQFIDYLDNYVKNFNISPLYNRAVELAEYLDDDDDDEKWKVKAKNKDSGEVEDYYGKFLVVASGETAEPRVPEVQGLEGFKGRVIHSTGYKNGIDFKDQHVLVVGSGNSGMEIALDLANFGAKPSIIVRSPVHFLSKDMMYYAGVLLNYLSLSTVEKLVVIVSRIVYGDLSKYGIPFPSEGPFTMKMKYGKFPVIDLGTVKKIKSGEIQVLPAEIESIKGNQMLFRDGKSYPFDSIIFCTGFKRSTQKWLKGGDDLLNEDGFAKGGLWKGKNGLYCVGLSRRGFYGANLEAQNVANDIASLVGSST* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0579 382 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Tpr6g0579 382 PRINTS FAD-dependent pyridine nucleotide reductase signature 176 194 - -
Tpr6g0579 382 SUPERFAMILY FAD/NAD(P)-binding domain 174 376 IPR036188 -
Tpr6g0579 382 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Tpr6g0579 382 PRINTS Pyridine nucleotide disulphide reductase class-II signature 172 196 - -
Tpr6g0579 382 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 3 379 - -
Tpr6g0579 382 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 3 379 - -
Tpr6g0579 382 PIRSF FMO 3 326 IPR000960 GO:0050660|GO:0050661
Tpr6g0579 382 SUPERFAMILY FAD/NAD(P)-binding domain 6 216 IPR036188 -
Tpr6g0579 382 Pfam Flavin-binding monooxygenase-like 6 319 IPR020946 GO:0004499|GO:0050660|GO:0050661
Tpr6g0579 382 Gene3D - 2 381 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0579 Tpr-Chr6 4743545 4747884 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0579 K11816 - gmx:100777958 603.208