Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0574 ATGGGAAAATCTAAGGGAAGTGTTGATGGAGTTCAAAGTGATGTGAAGGTTGTGGAGATGAGAACTATTTGGAAGAGTAGTGTTTATGATGTGTTGTTGAGGGTTCTTGCTTTTTTGCTTACTCTAACTGCTACTATTATTGTTGGTGTTGACAAAGAGACTAAGATCATTTCATATTCTGAATTGCAATTCAAAGTTACTGCTAAGTGGGAATATATGTCTGCTATTGTGTTTTTCTTGGTGTCAAACGCTATAGGATGTTCATATGCAGCAATTTCTATGGTGATTTCAACAATTGCAAGAACCAATGGAAACAAAACAACACTGTTAATAATAACAGTACTAGACCTTATCATAATGGCATTACTCTTCTCAGCCAATGGAGCAGGTGCTGCAGTGGGAGTGTTAGGACAGAAAGGAAACTCACATGTCCAATGGATGAAAGTGTGCAATATATTTGATGCCTATTGTCGTCACACCACTGTTGCTTTGGTTCTCTCTATCATTGGTTCCTCAATCTTCCTTTTGATTGTGGTTCACTCAGTTTTCAAACTTCATTATTATAGATCAAACTAG 576 0.3698 MGKSKGSVDGVQSDVKVVEMRTIWKSSVYDVLLRVLAFLLTLTATIIVGVDKETKIISYSELQFKVTAKWEYMSAIVFFLVSNAIGCSYAAISMVISTIARTNGNKTTLLIITVLDLIIMALLFSANGAGAAVGVLGQKGNSHVQWMKVCNIFDAYCRHTTVALVLSIIGSSIFLLIVVHSVFKLHYYRSN* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0574 191 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 32 184 IPR006459 -
Tpr6g0574 191 Pfam Casparian strip membrane protein domain 27 170 IPR006702 -
Tpr6g0574 191 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 8 187 - -
Tpr6g0574 191 PANTHER CASP-LIKE PROTEIN 1E1 8 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0574 Tpr-Chr6 4632816 4634555 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0574 - - gmx:100817307 224.557