Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0561 ATGCTTCATCAAAGGTCTATCGGTGTTCTTAATCGCTTTTTCTATCACAAACAACACTTCACTTCTACCGTCACTAAAACAAACTCACGATTCCCTTTCAAATTTTCACGTTTTACAGCTCCTAAGGTTCTATCAATGGCTACATCTCATTCCAATCGACTCGCTTCAGAACAAAGCCCTTATCTTCTTCAACACGCTCATAACCCTGTTGATTGGTATCCATGGGGAGAAGAAGCTTTTGCTGAAGCACGTCGCAGAGATGCACCTATCTTCTTATCAATTGGGTACAGCACTTGTCATTGGTGTCATGTTATGGAGGTTGAGTCTTTTGAGGATGAGGGGATTGCCAAGTTGTTGAATGATTGGTTTGTTAGCATTAAGGTGGATCGAGAGGAACGACCCGATGTTGATAAGGTATACATGACATATGTGCAGGCTTTGTATGGTGGAGGTGGTTGGCCCCTGACTGTGTTTCTTTCACCTGACTTGAAACCTTTAATGGGTGGAACTTACTTTCCCCCTGATGATAAATATGGCCGACCTGGATTTAAGACTATACTCAGAAAGGTAAAAGAGGCTTGGGAAAGTAAAAGGGATATGCTAGTTAAGAGTGGAACATTTGCAATTGAACAGCTTTCTGAGGCATTGTCTAGTAGTTCAGATTCTGGTAAATTACCTCATGGTGTTTCTGACGAAGCATTACGTCTATGCTCAGAGCAGCTCTCTGAGAACTATGATTCAGAATTCGGTGGCTTTGGATCTGCACCAAAATTTCCAAGACCGGTAGAGATCAACTTGATGCTTTACAACTCTAAAAAGTTGGAGGATACCGGAAAGTTAGATGGAGCTAACGAAAGTCAGAAAATGGTTTACTTTACCTTGCAATGCATGGCAAAAGGAGGCGTCCACGATCATGTTGGAGGAGGGTTTCACAGATATAGCGTGGATGAATGCTGGCATGTTCCACATTTTGAGAAGATGCTTTATGATCAAGGGCAGCTTGCTAATGTTTATTTAGATGCTTTTTCTATCACAAAAGATACCTTCTATTCATCTATATCACGGGATATCCTCGACTATTTGAGGAGAGATATGATTGGTCCAGAAGGTGAAATTTTTTCAGCAGAGGATGCTGACAGTGCCGAGAATGAAGGGGATACACGAAAAAAGGAAGGAGCCTTTTACATATGGACCAACAAAGAGGTTGAAGACTTACTTGGAGAGCACGCTGCTCTTTTTGCGGAGCACTATTACATAAAACAGATGGGTAACTGTGACCTATCTGAAATGAGTGATCCTCACAATGAATTCAAAGGACAGAATGTCCTGATTGAGAGAAAGGATCCTTCAGAAATGGCATCAAAATATGGCATGTCAATTGAGACATATCAAGAAATTCTTGGAGAATGCAGGCGTAAGTTGTTTGAAGTAAGGTTGAGGCGCCCAAAGCCACATTTGGATGATAAGGTTATTGTATCTTGGAATGGGTTGGCAATCTCATCTTTTGCTAGGGCTTCCAAGATTCTAAAGGGTGAAGCTGAAGGGATCAAGTTCAACTTTCCTGTTGTTGGTACTGAACCAGAGGAGTACTTGAGAATAGCAGGTAAAGCAGCATCCTTTATTAGGAATCAACTTTACAATGCAGAGACGCACAGGCTAAAACATAGTTTCAGAAATTCTCCATCTAAAGCTCCTGGTTTCTTGGATGATTATGCCTTTATGATTTCTGGATTACTGGATCTATATGAATTTGGGGGTGAAATCCACTGGCTTTTATGGGCCATTGAATTGCAGGAAACCCAGGATTCTTTGTTTCTTGATAGGGAGGGGGGTGGATATTTCAATAATACAGGAGAAGATTCTTCGGTTCTTCTCCGAGTGAAGGAAGACCATGACGGGGCAGAGCCCTCAGGGAACTCGGTCTCCGCAATAAATCTTATAAGGTTGGCTTCCATGGGTTCTGGAAGTAAGGCTGATTATTATAAGCGAAATGCAGAACATCTATTGGCAGTTTTTGAGAAAAGATTGAAAGATACAGCTATGGCAGTGCCTTTAATGTGTTGTGCAGCAGACATGCTGCGCGTACCTTCCCGGAAGCAAGTGGTAGTTGTGGGTGAAAGGACTTCCGAGGAATTTGAAAGCATGCTTGCTACAGCTCACGCAATATATGATCCCAACAGAACAGTTATTCATATAGATCCCAACAACAAAGAAGAGATTGAATTTTGGGAAGTAAATAACAGTAATATTGCTCTAATGGCAAAGAATAACAATGCAGCCAGCAAGGTTGTAGCTCTTGTATGTCAAAACTTCACTTGTAGCGCCCCGGTCACTGATCATTCATCACTTGAAGCTTTGCTCTCCCAAAAAGTGTGTGCCAGTTAA 2385 0.418 MLHQRSIGVLNRFFYHKQHFTSTVTKTNSRFPFKFSRFTAPKVLSMATSHSNRLASEQSPYLLQHAHNPVDWYPWGEEAFAEARRRDAPIFLSIGYSTCHWCHVMEVESFEDEGIAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLTVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKEAWESKRDMLVKSGTFAIEQLSEALSSSSDSGKLPHGVSDEALRLCSEQLSENYDSEFGGFGSAPKFPRPVEINLMLYNSKKLEDTGKLDGANESQKMVYFTLQCMAKGGVHDHVGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSSISRDILDYLRRDMIGPEGEIFSAEDADSAENEGDTRKKEGAFYIWTNKEVEDLLGEHAALFAEHYYIKQMGNCDLSEMSDPHNEFKGQNVLIERKDPSEMASKYGMSIETYQEILGECRRKLFEVRLRRPKPHLDDKVIVSWNGLAISSFARASKILKGEAEGIKFNFPVVGTEPEEYLRIAGKAASFIRNQLYNAETHRLKHSFRNSPSKAPGFLDDYAFMISGLLDLYEFGGEIHWLLWAIELQETQDSLFLDREGGGYFNNTGEDSSVLLRVKEDHDGAEPSGNSVSAINLIRLASMGSGSKADYYKRNAEHLLAVFEKRLKDTAMAVPLMCCAADMLRVPSRKQVVVVGERTSEEFESMLATAHAIYDPNRTVIHIDPNNKEEIEFWEVNNSNIALMAKNNNAASKVVALVCQNFTCSAPVTDHSSLEALLSQKVCAS* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0561 794 CDD SSP411 73 195 IPR004879 -
Tpr6g0561 794 Gene3D Glutaredoxin 49 221 - -
Tpr6g0561 794 SUPERFAMILY Thioredoxin-like 50 195 IPR036249 -
Tpr6g0561 794 Pfam Protein of unknown function, DUF255 52 211 IPR004879 -
Tpr6g0561 794 SUPERFAMILY Six-hairpin glycosidases 240 634 IPR008928 GO:0005975
Tpr6g0561 794 PIRSF UCP006402_thioredoxin 42 792 IPR024705 -
Tpr6g0561 794 Gene3D - 522 701 IPR012341 GO:0005975
Tpr6g0561 794 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 47 789 IPR024705 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0561 - - gmx:100777751 1338.55