Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0552 ATGATTTCTGCTGGAGATAGAGATGGAATAAAGGGATTAGGGTTAGGGTTAGGGTTAGGTAGTAGAAGGAAAGAGATGTTGGAGTTTGAGCTTGAAGAAGGTGAAGCTAGTTCATATCAAAACCGTGAAGATTATGATGCCACTGTTGATCCAGATGTTGCTCTTTCTTACATTGACGACAAACTTCAAGATGTCCTTGGACATTTTCAAAAAGATTTTGAAGGTGGCGTGTCTGCAGAGAATCTGGGGGCAAAATTTGGTGGTTATGGTTCATTTTTGCCTACCTATCAGCGTTCTCCTGCTTGGACTCAACCAAGGACTCCACAAAAAAATCATAGTCAAAATTCACCCAGATCTCCTAATAACATGCACGCGGAGAGTGGACAAGGGGATGCTGTACAATGTTCGACTGGAAATCAGTTATCGAGACTTGGCCCAGGTTCTGCTACCTCCTCGAGGCTGGCTGCAATTAAGGGATTCTCTTTAGATGATGGAACCAATCACGAAAAACGCACGGCAATCACTAATGTCGAGACATTAAATTCTAAATATGAGTCTCCAAACAGGAAAGCTGGTAGCATATCAGACCAGAAGACATTGAAGGTTCGTATCAAAATGGGTACTGATGATTTGTTAACGCGGAAAAATGCAGCAATATACAGTGGACTTGGTCTAGATGTGTCACCGTCATCATCACTGGATGACAGCCCCTCAGAAAGTGAAGGAATTTCTCGTGGTCCTCTGGATGCTCCCTTTGAATCTCCGGCCAGTATCCTTAAGATTATATCAACCCTCCCTAAGCTTTTGATGCCTCTTTCTGATGATCTCACTGAATTAACTGAGAAGGAAGTGCAAACCAGAGATTGCATCCCTGGTCCTGTTCATACGGATGACCCAGAAAATTCTGGTATGTTACTAAATGAATCTAATATTGTAAAAGGTGGCAGAAAATTGTTAGGAGGGAAAAAAGTTAAGTCCCTAGAGGGTTACGAGTCCTCGATGGAAGTCAAGGCTTGTAGTAAGAAGAATACTCGTAATGATGTTGGAGGGCCGTCAAAGAAAGAACAAGGTGAAGATGCATTGACTATGGAGGAACTAGTTTCAAAAACCATGAAACTTCCACTTTTGTCCAATTCATATTCTCTCGGTGACGACTCGGTAAAGAATGTACTTGTGCCATGTAATAATTCATTAAAGGAAGCCAAAAAGGGTGTGGTGAAGGAGAAAACCTTGTCGGACCAAGCACGAAAGGAACAGGTTGATCAAGCATCTGCCGAAGTGAATGGTTTTTCTGAAAGGGCAAAAGGAGGTTCTGGAAGAAAAGCTGTGGGAGATAAGGTTTTGCTCGATGACACAATAATAGCTGAATCTAATGTTTCCAAAGTTAGAACAGCATCAAGCACTGAATGCGTAGAGCCTCCTAAGAAGGCTAATCAGAGAGATAGCCTGGGCGAACAAGACAGTGCGGCATTGCCTTTTGTGACAGAACATCCATATCCTGGAGGGAAGAAGAAGTCAAAGGGAATTCGTGACACCGTGATTATAGAGAAGGAACAAGAAAATATGAAGGTTGGATCCTCTTTGATTCCCAAAACAAAAAGGGGTTCTGATGATAGTTATACATCAAAAAATGAAATTGAAGATGTCAAACTACGGAAGGGTCCTGGAAAGGCTAGAGAAGCTTATAGGGAATTCTTTGGAGAATTGGAAGATGAGGACGGGATTGATACACCAGAAACATCTTATGAAGATAAACTGAAAGAATCTGAAGGGGTTGAGAGAAGCGCTCCGGAAACAAATCTTGGAGAAAAGGAGACATCGGGTGGTAAGAAAGTTGACAAGTCAATGACAGAAGTATACCCTAAAACAGCCACAAATGTGAACGGAAATGGGGCTCCTACAATGTTGCCTCCTGTTGAGATGGAAGATAACTGGGTGCAGTGTGACAGATGTCATAAATGGCGTCTTCTTCCTGCTGGCACAAATCCTGATAGCCTACCCGAGAAATGGCTTTGTAGCATGCTTAATTGGCTGCCTGACATGAATCGATGTAGTTTTAGTGAGGATGAAACTACTAAAGCCCTTTTTACTCTATACCAAGGGCATCCTCTTGATGCTCAAAGCAACCTGCAAAATGGCTCAGGTAGTGTTATGGTGGGAGGAAATGGGGCAACTTTCCAGCATCCTGGTCAACGCCATCCAAGTAATGATCTGCACGGTGTGCCTGGTGGGAGGAAAAAAGTTGCAAAAGAAATATCAAATTCTTCAAATAAAGATGTCACTTCTCAATTTTCACATTCTATAAAGAAAAACATACAGTCATCAGTGAAAAGTAGGAGCTTAAATGACGTGAACAACTCTCCTGTTGTGGGTGAGGCTGATGCTTCAGGGGAGAAACACAAAAACAAGCCAAGGATGCCGGAGTACAATTCTGATAGAGGTGATACGAAGAATATGAAAAGCAGGAGGGATCCTGATCAAGATTATTCGAGGCCATCCAAGAAAAGTAAGACTGACAAGGTTCATTCTGCTGATAAAGAGTGGATTCCAGAACAGAATGGAACCACTAGGATGACCACTCCTCAGCTGGCAAGTATTCGAGGTCATAGCTCAAACAACACTTTGCCAACTGCTTCAGCTGGCAAAGATCGGCCTAGACAGAAAGACCACTCCTCATCAAGTGACTCCAAATTCAGAAAGGACAGACCACCAGTTTCTTCTGAGAAGAGAAAAAATAAGGGTCAGGATTCCTTGAATGAGGGGTCCCTGGATTTGGAGAATTGTTCCGTTGGTAGTGTAAAAAAGAGGAAATCGAAGGAGTATCAGGATGCTCAAGCTAATAGCACTGGTAATCCTCGCCAACACGAGAGTAGAATTTTCGAGCAGGAGTTCAGTGATTCCAGGAAGGAAAAGAAAGCAAAAAGTTCAAGATCTGAAGGCAAAGAGTCAAGTGCCAGCAAAGGCAGCGGCAGGACTGACAAAAAAGTCAGTCATACAAAGAACCAGAAATTCAGGCAAAATCCTGGAAGCAATCATTCACATCGGAGCATGGATGTCATGGACAGTTCGAAGAGGGACTTGGGATCTGTACAGGTTTCTGTTGCTGCCACTTCAAGCTCGTCTAAGGTTTCTGGCTCACATAAAACCAAAGCCAGCTTCCAGGAAGTGAAAGGCTCCCCTGTGGAATCAGTTTCTTCCTCACCTTTAAGAATTTTAAGTACAGATAAGTTTTCAAACAGAGAAGTTATGGTGAAAGACGAGCCTCATGATACTGCTGCTGTGGATAGTCCAAGAAGATGCGTAGACGGGGAAGATGACGGTGCAAGTGATCGATCAGAAACAGCTAGGAAGGACAAATTTTTCACCATGACCCACAGGTCTGATTTTCCGGGCAAGGGTAGTAATCATATGTCAGATACTAAGCCTAAAGCCCAAACAACCAGCCATTGTACTAATGGTGGTGTGGACACTATGGCCCACGATGGGTCATATCCAAGAGAGCAGATTAAGCATCATGGTGAAGACAAGACTGGTACTCATTATGCTAATGTGTCTCATGCAAGGAAAACTGGTACGGAGTCAGGTTTGGAGGAAAACAAGCAGGGCTGCAAGTCAGAGCCCTTTGCAGGAAAAGTCAAGAGTTCTAGTTCTCCTAGTCAACTGCCAGATCAGTCTCCTCTGCGTGAGACAAAACGTGTGGATGGAAAAGTTAAGTTGGAGGAGAAGTTTGGGCTCAAGCCTGACCAGAATGAAACTGTACATGCTAGCAAAAAAGACTTCCCGGTAAAAAATGAAAGTAGGAAAAAAGAGAATCATGTAAAGAAGGAGCATGACGTTCAGGAGGTTAGTATTGATGCCCTAAGCAAAATGGAACCATTACATGCTCCCACAAAGAATCAGTTGGCAGACTGTGATACTGAAAGATCTTCAAAGAGGTCCCTTTTGGAAAGACCTGATCAAGAAGTGCTTGGTAAAGGGAAGTCTCAAGTTGAGACTTTGAATCACTGCCCACGACCAGTCATTGGTTCCCACAAAGGGAATGGAGATATGGAAGTTGACCCGTCCAAAGCTGATGATGCGTCAAAGCTGCAAAAAAAGCAATTCAAAAAGGCTGATCATCAAAATGGAACTCCACAAGTTAGCTCCAGAAATCCTGCACTTAATGGACACAGATCCAAGGAGCTTGATGCCCCTAGTCCGGCTAGAAAGGATTCTTACAGCCATGCTGCTAACAATGCTGTGAGAGAAGCTAAAGATCTTAAGCACCTGGCCGATCGTCTTAAGAATTCTGGATCCACTCTTGAGAGCACTAATCTATACTTCCAGGCAGCCCTTAAGTTTCTAAATGGTGCCTCTCTATTGGAATCTGGCAACAATGATAATGCTAAACATAGTGAGATGATTCAATCAAAGCAGATGTACAGTAGCACAGCAAAATTGTGCGAGTTTTGTGCCCATGAATACGAGAAAGCAAAAGACATGGCTTCAGCTGCTCTGGCCTACAAATGCACCGAGGTCGCATATATGAGGGTAATATATTCTTCACACACTAGTGCAAGCAGAGATAGGCATGAGTTGCAGACAGCCCTACAAATGACTCCTCTTGGTGAATCTCCATCATCATCAGCCTCTGATGTTGACAATGTTAACAACTCTACAGCAGCTGACAAAGTTGTCCTATCCAAGAGTGTCAATTCACCCCAAGTTGCTGGAAACCATGTTATTGCTGCACGAAGTCGTCCAAATTTTGTCAGGATACTTAATTATGCCCAGGATGTGAATTTTGCCATGGAAGCCTCAAGGAAATCACGGAATGCATTTGCATCTGCTAATGCAAGCCTGGCCGTGGGCAAGAATGCAGATGGTATTTCCTCTATCAAGAAGGCCCTTGATTTTAGCTTTCAAGATGTGGACGGGTTACTACGTTTGGTACGGCTTGCTGTGGAAGCCATTAATCGTTAA 4962 0.4339 MISAGDRDGIKGLGLGLGLGSRRKEMLEFELEEGEASSYQNREDYDATVDPDVALSYIDDKLQDVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTYQRSPAWTQPRTPQKNHSQNSPRSPNNMHAESGQGDAVQCSTGNQLSRLGPGSATSSRLAAIKGFSLDDGTNHEKRTAITNVETLNSKYESPNRKAGSISDQKTLKVRIKMGTDDLLTRKNAAIYSGLGLDVSPSSSLDDSPSESEGISRGPLDAPFESPASILKIISTLPKLLMPLSDDLTELTEKEVQTRDCIPGPVHTDDPENSGMLLNESNIVKGGRKLLGGKKVKSLEGYESSMEVKACSKKNTRNDVGGPSKKEQGEDALTMEELVSKTMKLPLLSNSYSLGDDSVKNVLVPCNNSLKEAKKGVVKEKTLSDQARKEQVDQASAEVNGFSERAKGGSGRKAVGDKVLLDDTIIAESNVSKVRTASSTECVEPPKKANQRDSLGEQDSAALPFVTEHPYPGGKKKSKGIRDTVIIEKEQENMKVGSSLIPKTKRGSDDSYTSKNEIEDVKLRKGPGKAREAYREFFGELEDEDGIDTPETSYEDKLKESEGVERSAPETNLGEKETSGGKKVDKSMTEVYPKTATNVNGNGAPTMLPPVEMEDNWVQCDRCHKWRLLPAGTNPDSLPEKWLCSMLNWLPDMNRCSFSEDETTKALFTLYQGHPLDAQSNLQNGSGSVMVGGNGATFQHPGQRHPSNDLHGVPGGRKKVAKEISNSSNKDVTSQFSHSIKKNIQSSVKSRSLNDVNNSPVVGEADASGEKHKNKPRMPEYNSDRGDTKNMKSRRDPDQDYSRPSKKSKTDKVHSADKEWIPEQNGTTRMTTPQLASIRGHSSNNTLPTASAGKDRPRQKDHSSSSDSKFRKDRPPVSSEKRKNKGQDSLNEGSLDLENCSVGSVKKRKSKEYQDAQANSTGNPRQHESRIFEQEFSDSRKEKKAKSSRSEGKESSASKGSGRTDKKVSHTKNQKFRQNPGSNHSHRSMDVMDSSKRDLGSVQVSVAATSSSSKVSGSHKTKASFQEVKGSPVESVSSSPLRILSTDKFSNREVMVKDEPHDTAAVDSPRRCVDGEDDGASDRSETARKDKFFTMTHRSDFPGKGSNHMSDTKPKAQTTSHCTNGGVDTMAHDGSYPREQIKHHGEDKTGTHYANVSHARKTGTESGLEENKQGCKSEPFAGKVKSSSSPSQLPDQSPLRETKRVDGKVKLEEKFGLKPDQNETVHASKKDFPVKNESRKKENHVKKEHDVQEVSIDALSKMEPLHAPTKNQLADCDTERSSKRSLLERPDQEVLGKGKSQVETLNHCPRPVIGSHKGNGDMEVDPSKADDASKLQKKQFKKADHQNGTPQVSSRNPALNGHRSKELDAPSPARKDSYSHAANNAVREAKDLKHLADRLKNSGSTLESTNLYFQAALKFLNGASLLESGNNDNAKHSEMIQSKQMYSSTAKLCEFCAHEYEKAKDMASAALAYKCTEVAYMRVIYSSHTSASRDRHELQTALQMTPLGESPSSSASDVDNVNNSTAADKVVLSKSVNSPQVAGNHVIAARSRPNFVRILNYAQDVNFAMEASRKSRNAFASANASLAVGKNADGISSIKKALDFSFQDVDGLLRLVRLAVEAINR* 1654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 1026 1067 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 1373 1388 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 1080 1125 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 1163 1182 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 730 1067 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 1210 1226 - -
Tpr6g0552 1653 PANTHER CW-TYPE ZINC FINGER 28 1651 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 579 614 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 1128 1154 - -
Tpr6g0552 1653 Pfam CW-type Zinc Finger 644 690 IPR011124 GO:0008270
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 1080 1407 - -
Tpr6g0552 1653 Gene3D - 637 694 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 228 249 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 1349 1372 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 464 508 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 1002 1016 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 882 917 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 413 439 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 754 789 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 956 1000 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 794 847 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 101 136 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 1227 1284 - -
Tpr6g0552 1653 PANTHER CW-TYPE ZINC FINGER 28 1651 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 1304 1324 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 569 614 - -
Tpr6g0552 1653 MobiDBLite consensus disorder prediction 849 880 - -
Tpr6g0552 1653 ProSiteProfiles Zinc finger CW-type profile. 639 692 IPR011124 GO:0008270
Tpr6g0552 1653 Coils Coil 1410 1430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0552 Tpr-Chr6 4491432 4500774 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0552 - - aprc:113860968 2284.22