Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0548 ATGAATCCTATTTGTTTTGTTGACAACAAAGAAGACAATGAAGTGAAATCGGCTGAAGGATTACTTACTTCAGATGTTTCTGGCATGGAAGAAGATGATGAATTTGGAGAACCAGAAGTGGTACCTCGTGTTGGAGATGAGTACCAGGCAGAACTTCCGCCATTTACTGCAGCACCTTATTTTTCTCAGCTTGCAAAAATGAAAGGAGATTCAGAAATTGCTGTCAATATGCCAGACTCTTCTGTAGTAGGACTACCCCTTCCTCTTATGTGGACACATTCTGAATTCGATAGGAGTTGGGGTGGTGAGACTTTAAAATCTGTCACAAGTCAAAAGGGGCGTGGTATTTGTGAAGGAAAAAATGTAGGAGGGTTTCCAAATTTTAAATCCTCTTACAGAAATGTTGGGACAGACATTAACTCGTGCTCAGAACTGAGAACCGAACTAGATCAGCCAAGACACAAGTATCTTCTTCCTGAATTGTTGGGTTGTCAGTCTTGGACAGATATTGAATATAACAGTTTTCTTCTTGGCCTCTATGCATTTGGGAAGAACCTTAATTTTTTGAAGAGATTTGTTGGGACTAAAAGTATGGGAGACATATTGTTTTTCTATTACGGTAAATTTTTTAGGTCTAAAGGATATTCCCGGTGGTCAAAATGTCGGAAGTCGAAAACCAGGCGATGTATATTTGGACAGAAAATATTCACTGGTTGGAGACAACAAGAATTGCTATCAAGATTATTTCCCCACGTGGCACAGGACCGTAAAACTACTTTGGTTGAGATTTCGAGGAGTTTTGGGGAGGGAAAGATGCCATTTGAAGATTACGTATTTGCTCTAAAGGATGCTGTTGGCATTGAATTCCTTATAGCTGCAGTAGCTATTGGCCAAGGGAAGCATGATCTCACAGGCACTGCTCTTGAGCCACCAAAGACGAATCACGTATTTTCTGTTCGCCACGAAATACCAGCCGGCAAAGCTTGCTCCTCTCTTACACCTGCAGATATAATCAAAATTCTAACAGGAGATTTTAGATTAAGTAAAGCTCGATCCAGTGATCTTTTCTGGGAAGCTGTTTGGCCTCGTCTTTTAGCAAACGGTTGGCGTTCTGAAGAGCCAAAGGATAATTATGTTTCTGGGACAAAACAAACTTTGGTTTTTCTTGTACCCGGTGTTAAGAAGTTTTCAAGAAGGAAACTGGAAAAAGGTAAGCAATACTTTGATTCTATAAGTGATGTACTGAATAAAGTGTCATCTAACCCTAAGCTTCTTGAGACTGAAATTCAAGCAACTGAGGGTATTGTAGATAAGGAAAACATGCAAAACAAACAAAACCAAGACAGTGTGTCAAATACACATCAATGTCCTTCGTTTCAATCTCATAATTCAAAGTGCAAACCGGATCCCGTGAAATTTACAATTGTAGACACCAGCATGGTTCATGAAACTAATAGACGTAAAGTGAGACAGACGAAAGGCTTACCTTTTCAACCTGAAAATATATCTACCATCTCAAGCTGCAGTTCTAGTGAATCTGAGACAGCTACATCTGAAGACTCGGAATATCAAATTGAGGAAGCTAATGCTTCAAGTCCTACTGAAGTTCAGGTTGAACAAGCTAATTCTTTACACCATGCTGAAGATCAGGTTGGACATGCTAATTCTTTACACCATACTGAAGATCAGATTGGACACGCTAATTCTTCATACCGTGCTAAAGTTCAGGTTGGACACGCTAATTCTTCATATCGTGTTGAAGATCAGGTTGGGCACGCTAATTCTTCAGACCATGTTGAAGATCAGGTTGCGCGTGCTAATTCTTCAGACCGTGTTGAAGATCAGGTTTCGCATGCTAATTCTTCACACCGTGTTGAAGATCAGGTTGGGCGTGCTAATTCTTCACACCTTGTTGAAGATCAGGTTGAGCATGCTAATTCTTCAGACCGTGTTAATTCTTCATACCTTGTTGAAGATCAGGTTGAGCTTGCTAATTCTTCGGACCGTGTTGAAGATCAGGTTGTGCGTGCTAATTCTTCAGTCTGTGTTGAAGATCAGGTTTCGCATGCTAATTCTTCACACCGTGTTGAAGATCAGGTTGGGCGTGCTAATTCTTCACACCGCGTTGAAGATCAGGTTGAGCATGCTAATTCTTCAGACCGCGTTGAAGATCAGGTTGTGCGTGCTAATTCTTCAGTCTGTGTTGAAGATCAGGTTGCGCATGCTAATTCTTCAGACCGTGTTGAAGACCAGGTTGAGCAAGCTAATTCTACAGACCATGTTGATCATCAGGTTGAGCATGCTAATTCTTCATACCGTGTTGAGGATCAGGTTGAACCTGCTAATTCATCATACAGTGTTGTAGATCGGGTTGAGCAAGCTAATGCTTTAAGTCCTATTGAAGATCAGGCTGAACGTACCAATTCTTCATTCCATGTTGAGCATGCTAATTCTGACAACCATGTTGAAGAAATCTCAGATAAGGGGATGCACATAAACTCATCAGGTCATGCTCATAATCCTGAGACCCTCAACACCACGGAAGTAGAAAATTATAAATGCCACTCTGATCTGCCTGATGATGAGCATTCAAGGGAGCTGAATGAGCAGCCAGTGATTCAAAAGATGACATCTGATGATTGCACAAAACCTTTTCCCTGCGCCACAAAAATGCAGGAGTTAAGAGCTTGTAGCCACGGAGAGTTTAGCCTTAGTGCTGAAAATACTTCTATGGACAGAAAATTTGATTTAAATGAGCCATTTTCACTGTCAAATCCACATGAAGCATCGGAGGGCATGGATTTTTCTGTAGGTTTAGACACTTTGTCTTTCCCAAATTATCCGGCTAAAGGCAGTCCAAATATGAGCCATGAAGGCAGTGTCACTGAAACCAGGATGTTGATCGACTTGAATTCTGAAACCAGGATGTTGATCGACTTGAACTCTGAAACCAGGATGTTGATCGACTTGAATTTTCCTCAAGTTCCACCTGACTTATCACTTGAAATGGAAATACCATCCTCTAAGGCAATACAGCTAAACGATGACCAATGGGCGCATACATTGTCATCTTCATCCGAGACAACCCAGCTCAACATGAAACCAGAGATTCCTGATTTAAATTGCACGAAACCAGAGATTCCTGATTTAAATAAGGAGCACCAACCAAGCATTGTTAACCGCCGTCAAAGTACAAGGAACCGGCCATTAACAACAAAGGCACTGGAAGCTCTTGAGTATGGATTTCTCAACTCAAAGAGGAAGAGGAAGAACACAGAATCTTCAGACAATAATTCAAAGTCCCAATGTTTACGTCCAAGTAACGAGACAATTATCGATGTTACTTGTGATAATAGCATTGGGAACTCTATCGCAGACACAAGTGCAAAGGAGGAAAATGTTATAAGGGAATATAGTTTCATTGTTTAG 3429 0.4097 MNPICFVDNKEDNEVKSAEGLLTSDVSGMEEDDEFGEPEVVPRVGDEYQAELPPFTAAPYFSQLAKMKGDSEIAVNMPDSSVVGLPLPLMWTHSEFDRSWGGETLKSVTSQKGRGICEGKNVGGFPNFKSSYRNVGTDINSCSELRTELDQPRHKYLLPELLGCQSWTDIEYNSFLLGLYAFGKNLNFLKRFVGTKSMGDILFFYYGKFFRSKGYSRWSKCRKSKTRRCIFGQKIFTGWRQQELLSRLFPHVAQDRKTTLVEISRSFGEGKMPFEDYVFALKDAVGIEFLIAAVAIGQGKHDLTGTALEPPKTNHVFSVRHEIPAGKACSSLTPADIIKILTGDFRLSKARSSDLFWEAVWPRLLANGWRSEEPKDNYVSGTKQTLVFLVPGVKKFSRRKLEKGKQYFDSISDVLNKVSSNPKLLETEIQATEGIVDKENMQNKQNQDSVSNTHQCPSFQSHNSKCKPDPVKFTIVDTSMVHETNRRKVRQTKGLPFQPENISTISSCSSSESETATSEDSEYQIEEANASSPTEVQVEQANSLHHAEDQVGHANSLHHTEDQIGHANSSYRAKVQVGHANSSYRVEDQVGHANSSDHVEDQVARANSSDRVEDQVSHANSSHRVEDQVGRANSSHLVEDQVEHANSSDRVNSSYLVEDQVELANSSDRVEDQVVRANSSVCVEDQVSHANSSHRVEDQVGRANSSHRVEDQVEHANSSDRVEDQVVRANSSVCVEDQVAHANSSDRVEDQVEQANSTDHVDHQVEHANSSYRVEDQVEPANSSYSVVDRVEQANALSPIEDQAERTNSSFHVEHANSDNHVEEISDKGMHINSSGHAHNPETLNTTEVENYKCHSDLPDDEHSRELNEQPVIQKMTSDDCTKPFPCATKMQELRACSHGEFSLSAENTSMDRKFDLNEPFSLSNPHEASEGMDFSVGLDTLSFPNYPAKGSPNMSHEGSVTETRMLIDLNSETRMLIDLNSETRMLIDLNFPQVPPDLSLEMEIPSSKAIQLNDDQWAHTLSSSSETTQLNMKPEIPDLNCTKPEIPDLNKEHQPSIVNRRQSTRNRPLTTKALEALEYGFLNSKRKRKNTESSDNNSKSQCLRPSNETIIDVTCDNSIGNSIADTSAKEENVIREYSFIV* 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0548 1142 MobiDBLite consensus disorder prediction 589 653 - -
Tpr6g0548 1142 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 9 755 - -
Tpr6g0548 1142 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 740 1136 - -
Tpr6g0548 1142 MobiDBLite consensus disorder prediction 436 464 - -
Tpr6g0548 1142 MobiDBLite consensus disorder prediction 496 544 - -
Tpr6g0548 1142 ProSiteProfiles SANT domain profile. 162 213 IPR017884 -
Tpr6g0548 1142 MobiDBLite consensus disorder prediction 484 546 - -
Tpr6g0548 1142 MobiDBLite consensus disorder prediction 591 625 - -
Tpr6g0548 1142 SUPERFAMILY Homeodomain-like 166 213 IPR009057 -
Tpr6g0548 1142 MobiDBLite consensus disorder prediction 685 705 - -
Tpr6g0548 1142 MobiDBLite consensus disorder prediction 690 705 - -
Tpr6g0548 1142 PANTHER ATROPHIN-RELATED 9 755 - -
Tpr6g0548 1142 PANTHER ATROPHIN-RELATED 740 1136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0548 Tpr-Chr6 4437785 4443998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0548 - - cam:101506286 809.675