Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0540 ATGAGGATCGTTGGACTGACTGGTGGAATAGCAAGTGGCAAGAGCACCGTTTCCAATTTATTCAAGTCTCATGACATCCCCGTTGTTGATGCTGATGTAGTTGCTCGCGAGGCGTTGAAGAAAGGGAGTGGTGGATGGAAAAAAGTCGTTGCTGCGTTTGGGGAGGAAATTCTACTTGAAAATAGTGAAGTTAATAGAACTAGACTGGGTCAAATTGTTTTTGCTGATCCCGATAAGCGTCAATTTCTCAATCGATTGTTAGCACCTTATATATCTTCCGGGATCTTTTGGGAAGTTGTGAAGTTGTGGTCGAAAGGTTACAAGGTCATTGTTCTCGATGTCCCTTTGTTATTTGAGGCCAAGATAGACAAGTTCACGAAGCCCATTATTGTTGTGTGGGTTGATCCTGAAACACAGATTCAAAGACTCTTGACAAGAGACAAGTCCAGTGAGGAGGATGGTCGTAACAGGGTTAATGCTCAGATGCCGCTGGATGCTAAAAAGAGTAAAGCTGATATAGTAATTGACAACACCGGTTCACTAGACGACTTGAATGAACAATTTCAAAAGGTTTTGGTTCGTGTGACTGGACCCTTGGCATGGTATGAGTTTTGGCGTTCTAGGCAGGGAGTCTCGATCATTCTTGCTTCACTTACCTCAGGTGTTGTTCTATGTATGAGGGCATTTAACAACAACAATTCATAG 705 0.4298 MRIVGLTGGIASGKSTVSNLFKSHDIPVVDADVVAREALKKGSGGWKKVVAAFGEEILLENSEVNRTRLGQIVFADPDKRQFLNRLLAPYISSGIFWEVVKLWSKGYKVIVLDVPLLFEAKIDKFTKPIIVVWVDPETQIQRLLTRDKSSEEDGRNRVNAQMPLDAKKSKADIVIDNTGSLDDLNEQFQKVLVRVTGPLAWYEFWRSRQGVSIILASLTSGVVLCMRAFNNNNS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0540 234 PANTHER DEPHOSPHO-COA KINASE 1 226 - -
Tpr6g0540 234 CDD DPCK 3 183 - -
Tpr6g0540 234 PANTHER DEPHOSPHO-COA KINASE-RELATED 1 226 - -
Tpr6g0540 234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 191 IPR027417 -
Tpr6g0540 234 Gene3D - 1 197 IPR027417 -
Tpr6g0540 234 TIGRFAM TIGR00152: dephospho-CoA kinase 3 190 IPR001977 GO:0004140|GO:0005524|GO:0015937
Tpr6g0540 234 Pfam Dephospho-CoA kinase 3 182 IPR001977 GO:0004140|GO:0005524|GO:0015937
Tpr6g0540 234 Hamap Dephospho-CoA kinase [coaE]. 1 198 IPR001977 GO:0004140|GO:0005524|GO:0015937
Tpr6g0540 234 ProSiteProfiles Dephospho-CoA kinase (DPCK) domain profile. 3 206 IPR001977 GO:0004140|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0540 Tpr-Chr6 4373095 4380164 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0540 K00859 - gmx:100791096 396.356