Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0536 ATGGATGGACATGACTCAGAAGACCCAAAACAAAGCACTGCTGATATGACTGTTTTTGTGCAAAATCTTCTTCAGCAGATGCAAACTAGGTTCCAGACAATGTCTGACTCCATCATTACAAAGATTGACGATATGGGAAGCCGTATAACTGAGTTGGAGCAAAGCATCAATGACCTAAGAGCAGAGATGGGAGTGGAGAGCTCTCCATCACCTGCTAAGCCAAAGGAAGAAGGGTCGAACAAAGAAGATTCAGCATAA 258 0.4341 MDGHDSEDPKQSTADMTVFVQNLLQQMQTRFQTMSDSIITKIDDMGSRITELEQSINDLRAEMGVESSPSPAKPKEEGSNKEDSA* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0536 85 PANTHER HEAT SHOCK FACTOR-BINDING PROTEIN 1-LIKE 1 79 - -
Tpr6g0536 85 PANTHER HEAT SHOCK FACTOR BINDING PROTEIN 1 1 79 IPR009643 GO:0003714
Tpr6g0536 85 Coils Coil 42 62 - -
Tpr6g0536 85 MobiDBLite consensus disorder prediction 59 85 - -
Tpr6g0536 85 Pfam Heat shock factor binding protein 1 15 62 IPR009643 GO:0003714
Tpr6g0536 85 Gene3D - 9 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0536 Tpr-Chr6 4351115 4354098 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0536 K19765 - gmx:100781854 143.665