Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0535 ATGGAAATCGGAGGCAGAAGATTGAAAAACGTAGAAACAATGGCCGTGGAATCCGTTACACAATCAGCACCTCCGCCTAGATCAAAACCAAGCAACGCTTTCATGGAAAACCCCAAAATACCCATAGCAGTTTCTCTTCTCATTGCCGATTCAATCCTCATCTTCCTCATCATCGCATTTGTCCCCTATACAAAAATAGATTGGGATGCTTACATGTCACAGGTTGAAGGGTTTCTAGGAGGTGAGAGAGATTACCGTAATCTAAAGGGTGATACTGGTCCTCTTGTTTACCCTGCTGGTTTTCTCTATATTTACTCTGCATTTCTGTATCTTACTGGAGGACAGGTTTACCCTGCTCAGATTTTGTTTGGAGTTTTGTATATCATTAATCTTGCAATCGTTATATACATCTATGTCAAAACTGATGTGCTACCGTGGTGGGCTCTTTGCTTACTTTCTCTGTCAAAACGAGTGCATTCTATCTTTGTCCTCCGTCTCTTTAATGATTGTGTGGCCATGACACTTCTTCATGCTGCATTGCTCTTCCTCATGCACCGAAGGTGGAATCTAGGTTTGATTGTGTTTAGCGTGGCTGTTTCGGTTAAGATGAATGTTCTTCTTTATGCTCCGCCTTTACTGCTGCTCATGCTAAAGGCTATGGATATCAGTGGTGTGTTATTGGCTTTAGCTGGTGCAGCACTGGTTCAGATATTATTGGGGCTTCCTTTCCTGGTTTCACATCCAGTTGCATACATATCAGGAGCCTTCAATCTTGGCCGCGTCTTCATCCATTTCTGGTCTGTTAACTTCAAATTCATCCCTGAACCAGTATTTGTATCCAAGGGATTTGCAATCTTTTTGTTGGCTGCTCACCTTATAGCACTTGCTTCATTTGCACATTATAGATGGTGCAAACATGAAGGAGGGCTTCTAAAGTTTCTGCATTCAAGATATGTCTTTATGAGAATGAAGTTTGCACTTTTCTTCTCCTCCTCTTTTCAGAAGTTTGGCAAGAGCACTTCAACATCCATCAAGATCCTCACTAAAGAACATATCGTGACTACTATGTTTGTTGGAAACTTCATTGGCATTGTATGCGCTCGGTCATTGCATTATCAATTCTATTCATGGTACTTCTATACCTTACCATACTTGTTGTGGAGAACACGCTACCCAACATTGGTCCGATTAATTTTGTTCCTGGGAGTGGAGCTGTGCTGGAATATCTATCCTTCAAACAACATTTCATCAGCTTTACTTCTCTGCCTTCACTTAATTATTCTCTGGGGTTTGTGGTCTGCTCCACCAGAGTATCCTTATGCAGAAAAAGAACCATCATCCCACAAAAACAAATAG 1356 0.4145 MEIGGRRLKNVETMAVESVTQSAPPPRSKPSNAFMENPKIPIAVSLLIADSILIFLIIAFVPYTKIDWDAYMSQVEGFLGGERDYRNLKGDTGPLVYPAGFLYIYSAFLYLTGGQVYPAQILFGVLYIINLAIVIYIYVKTDVLPWWALCLLSLSKRVHSIFVLRLFNDCVAMTLLHAALLFLMHRRWNLGLIVFSVAVSVKMNVLLYAPPLLLLMLKAMDISGVLLALAGAALVQILLGLPFLVSHPVAYISGAFNLGRVFIHFWSVNFKFIPEPVFVSKGFAIFLLAAHLIALASFAHYRWCKHEGGLLKFLHSRYVFMRMKFALFFSSSFQKFGKSTSTSIKILTKEHIVTTMFVGNFIGIVCARSLHYQFYSWYFYTLPYLLWRTRYPTLVRLILFLGVELCWNIYPSNNISSALLLCLHLIILWGLWSAPPEYPYAEKEPSSHKNK* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0535 451 Pfam ALG3 protein 45 417 IPR007873 GO:0000030
Tpr6g0535 451 PANTHER NOT56 - RELATED 36 450 IPR007873 GO:0000030
Tpr6g0535 451 PANTHER DOL-P-MAN:MAN(5)GLCNAC(2)-PP-DOL ALPHA-1,3-MANNOSYLTRANSFERASE 36 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0535 Tpr-Chr6 4345495 4350439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0535 36 451 Miscellaneous Gene Families AT2G47760 70.264 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0535 K03845 - gmx:100785253 745.347