Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0534 ATGGCAGCAGCACCATCTTCCACCACAGACCTCAAACAACGAATCATAACACCTGATCAAGGACAAACAACAACAACAACAACCACAAACAACAAAAATGGATCAACAATTAACAGCAAAAGAGACAAAAGAACCGCAATGGCAAAACGTGGTCTTAGATCACTCATAATAGCAGTTTCATTCCCTCTCTCAATAACCCTTTTATCCATTTACATATCTACTTCATTCACCTCTTCAAACCACATCAACCTAGTCATAACCAGTTCAAAAAAGCCATTTTGGTTTCCACCTTCCTGGGCTTTACACCTTATGTTACCTGCTTCAAGCTTCTTGATGGGTCTTTCAGCTTGGATGGTGTGGGCTGATGGTGGCTTTCATAGAAATCCAACTGCTTTTTTGCTTTACTTGCTTCAGCTTATCTTTACTGTTCTGTGGGATCCTTTTGTTTTTGGAGTTGGAGCAACGAGTTTTGGTTTGTTGATTTGTTTTGGAATTTTTGGGAGTATGTTTGGGTGTATGCGTTTGTTTGAGAAGGTTAATCCTATTGCTAGTAGTTTGATAAAGCCTTGTTTGGCTTGTATTGCTTTTCTTTCCATTGTTAATCTGAAGCTAGTTTTTATCTGA 624 0.3878 MAAAPSSTTDLKQRIITPDQGQTTTTTTTNNKNGSTINSKRDKRTAMAKRGLRSLIIAVSFPLSITLLSIYISTSFTSSNHINLVITSSKKPFWFPPSWALHLMLPASSFLMGLSAWMVWADGGFHRNPTAFLLYLLQLIFTVLWDPFVFGVGATSFGLLICFGIFGSMFGCMRLFEKVNPIASSLIKPCLACIAFLSIVNLKLVFI* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0534 207 PANTHER TSPO/MBR FAMILY PROTEIN 32 206 - -
Tpr6g0534 207 CDD TSPO_MBR 75 205 IPR004307 GO:0016021
Tpr6g0534 207 MobiDBLite consensus disorder prediction 1 36 - -
Tpr6g0534 207 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 32 206 IPR004307 GO:0016021
Tpr6g0534 207 MobiDBLite consensus disorder prediction 1 43 - -
Tpr6g0534 207 Gene3D TspO/MBR protein 52 207 IPR038330 -
Tpr6g0534 207 Pfam TspO/MBR family 67 205 IPR004307 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0534 Tpr-Chr6 4344046 4344781 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0534 K05770 - gmx:100785785 224.557