Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0533 ATGTTAGAAAAATGTTTGGGACCTCAAAGAGCTAGAAAATTTCAGAGATTTCTCAACCATTGTAAGGTTACAATCCTCTGTCTCTTCCTCACCATTATTGTCCTACGTGGCACCATCGGCGCCGGTAAATTCGGTACGCCGGAGCAAGATTTCGTCGACATTCGCAACCGTTTCACCTCTCGTAAGCTACCCGAATCATCTCACCGCATTCTCGGCGAGATTCATTCAACAACAACATCAACATCTTCTTCTCGTTCAGATAGTTCCACTTCTTCAACAAACAATTACAATGCTTTCGATATCAACACAATATTGGTCGATGAAGAAGAAGAAGACAAAAAACGCAGCTTGAATGAGCCTTATCGTTTAGGACCAAAAATTTCGAATTGGGATGAACAGAGATCAAAATGGCTTCTTGAAAACCCCAATTTCCCAAATTTTATTCGACCCGAAAAGCCTCGTGTGCTTTTGGTAACTGGGTCATCGCCAAAATCATGTGAGAATCCGGTTGGTGATCATTACTTGTTGAAGTCGATTAAGAACAAGATTGATTATTGTCGTTTACATGGTATTGAGGTTTTTTACAATATGGCTCTTTTTGATGCTGAAATGGCTGGTTTTTGGGCAAAGCTTCCATTGATTCGTAAGCTTCTTTTGTCACACCCAGAAGTGGAGTTTCTATGGTGGATGGATAGTGATGCTATGTTTACCGATATGGCCTTTGAGGTTCCTTGGGAGAAGTATAAAGATTCTAATTTGGTTATGCATGGTTGGAATGAGATGGTTTATGATCAGAAGAATTGGATTGGGTTGAATACCGGTAGTTTTTTGTTGAGGAATTGTCAATGGTCATTGGATATTCTTGATGCTTGGGCACCAATGGGACCAAAAGGGAAAGTTAGGGATGAAGCGGGGAAAGTGCTTACACGCGAACTCAAAGATAGGCCGGTTTTTGAAGCGGATGATCAATCTGCTATGGTTTATTTGTTGGCTAAGGAGAAGGAAAAATGGGGTGATAAGGTTTATCTTGAGAATGGTTATTACTTGCATGGTTATTGGGGGATTTTGGTCGATAGATATGAGGAAATGATTGAGAATTATCATCCTGGTTTTGGTGATCATAGGTGGCCATTGGTGACTCATTTTGTGGGGTGTAAGCCTTGTGGGAAGTTTGGGGATTATCCTGTTGAGAGATGCTTGAAGCAGATGGACAGAGCTTTCAATTTCGGTGATAATCAGATATTACAGATTTATGGATTCACACATAAATCATTGGTTAGTAGGAGAGTTAGGAGAATAAGGAATGAGACTAATAATCCTCTTGAGGTTAAAGATGAACTTGGTTTGCTCCATCCAACTTTTAAAGCTGTTGAGGTATCATCTTCTAGGTGA 1392 0.403 MLEKCLGPQRARKFQRFLNHCKVTILCLFLTIIVLRGTIGAGKFGTPEQDFVDIRNRFTSRKLPESSHRILGEIHSTTTSTSSSRSDSSTSSTNNYNAFDINTILVDEEEEDKKRSLNEPYRLGPKISNWDEQRSKWLLENPNFPNFIRPEKPRVLLVTGSSPKSCENPVGDHYLLKSIKNKIDYCRLHGIEVFYNMALFDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWEKYKDSNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKEKEKWGDKVYLENGYYLHGYWGILVDRYEEMIENYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHKSLVSRRVRRIRNETNNPLEVKDELGLLHPTFKAVEVSSSR* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0533 463 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED 4 462 - -
Tpr6g0533 463 MobiDBLite consensus disorder prediction 71 92 - -
Tpr6g0533 463 MobiDBLite consensus disorder prediction 69 92 - -
Tpr6g0533 463 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 462 IPR008630 GO:0016021|GO:0016757
Tpr6g0533 463 Pfam galactosyl transferase GMA12/MNN10 family 152 391 IPR008630 GO:0016021|GO:0016757
Tpr6g0533 463 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 151 307 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0533 Tpr-Chr6 4341242 4342633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0533 1 462 Glycosyltransferase AT3G62720 76.674 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0533 K08238 - gmx:100794266 835.484