Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0530 ATGGAAACAATTGCGGCCATGGATGTTGAGGAACAACCTTCGCCCACACCCAACAACGTTAAACGCTTCGGTCTTAAAAACTCCATTCAAACTAATTTCGGCGAAGACTATGTTTTCCAAATCATCCCAAAGGATGATTGGAGTGCAATGGCGGTTTCACTGTCAACGAATGCAGTGAAATTGTATTCACCGGTGTTGGGTCAATATTATGGAGAGTGCAAGGGTCACTCTGCAACTATCAATCAGATTTTGTTTTCGGGTCATTCTAATGATCCTCATATTCTAAGCTCATGTTCTTCAGATGGTACTATCAGAGCTTGGGACACAAGAACCTTTCAGCAGGTTTCTACCATCAATGCCGGTCCTTCACAAGAAATCTTCAGCTTTTCTATTGGAGGACCTTGTGGAAATTTAATTGCTGCTGGTTGTGATTCACAGGTACTCATATGGGATCGGAGATATAACAAGCAAATGGCATGCCTGGAAGATTCTCATGTGGACGATGTTACTCAGGTTCATTTTGTCCCTGGTGAACCAGGCAAGCTCATTTCGGCTTCAGTAGACGGGTTGATCTGCATATTTGATACCAGTGGAGATATTGATGATGATGATCATCTAGATTTAGTGATTAATGTGGGGACTTCAATTGCAAAGGTGGGATTTTTTGAAGAAAATTATCAGAAACTTTGGTGTTTAACACATATTGAAACTCTTGGTATCTGGGACTGGAAAGATAGTAGAAATGAAGTAAACTTCTCAGATGCACGGACTTTAGCTTCTGAAAGTTGGAATTTGGATCATGTTGACTATTTTGTTGATTGTCACTACTCCAAAGAAGCCGAAAAACTATGGTTGATTGGCGGCACAAATGCGGGTACATTGGGTTACTTTCCTGTAAATTACAATGGAATGGCAACAATTGGAGCTGCAGAAGCAATTCTCGAAGGTGGCCATACAGGTATTGTTAGAAGTGTTCTACCTATGTCCAGAGTTCATAATGAAATCGGTAGCAGTAGTAGTCATAGCTCGGGCATTTTTGGATGGACGGGTGGGGAAGATGGAAGACTATGTTGTTGGTTGTCTGATGATTCCCCTCAAAAAAATCAATCTTGGATTTCAAGTTCATTGATTATGAAACCAGAAAGAACTTGCAAGAAAAATCGTCATCATCCCTACTAA 1179 0.408 METIAAMDVEEQPSPTPNNVKRFGLKNSIQTNFGEDYVFQIIPKDDWSAMAVSLSTNAVKLYSPVLGQYYGECKGHSATINQILFSGHSNDPHILSSCSSDGTIRAWDTRTFQQVSTINAGPSQEIFSFSIGGPCGNLIAAGCDSQVLIWDRRYNKQMACLEDSHVDDVTQVHFVPGEPGKLISASVDGLICIFDTSGDIDDDDHLDLVINVGTSIAKVGFFEENYQKLWCLTHIETLGIWDWKDSRNEVNFSDARTLASESWNLDHVDYFVDCHYSKEAEKLWLIGGTNAGTLGYFPVNYNGMATIGAAEAILEGGHTGIVRSVLPMSRVHNEIGSSSSHSSGIFGWTGGEDGRLCCWLSDDSPQKNQSWISSSLIMKPERTCKKNRHHPY* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0530 392 ProSitePatterns Trp-Asp (WD) repeats signature. 95 109 IPR019775 -
Tpr6g0530 392 SUPERFAMILY WD40 repeat-like 36 359 IPR036322 GO:0005515
Tpr6g0530 392 Gene3D - 14 163 IPR015943 GO:0005515
Tpr6g0530 392 PANTHER UNCHARACTERIZED 21 392 IPR039328 -
Tpr6g0530 392 ProSiteProfiles Trp-Asp (WD) repeats profile. 73 117 IPR001680 GO:0005515
Tpr6g0530 392 SMART WD40_4 154 195 IPR001680 GO:0005515
Tpr6g0530 392 SMART WD40_4 66 108 IPR001680 GO:0005515
Tpr6g0530 392 SMART WD40_4 111 151 IPR001680 GO:0005515
Tpr6g0530 392 Pfam WD domain, G-beta repeat 70 108 IPR001680 GO:0005515
Tpr6g0530 392 Gene3D - 164 378 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0530 K24758 - gmx:100794786 662.144