Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0527 ATGGCTCAGGTTTCAGAGAAACAAGTGATGGTTGTTGGCATCGATGACAGTAATTATAGCTCCTATGCTCTTGAATGGACTCTTGATCATTTGATTACTACACTGCCAAATCCAATCTTCAAACTTGTTCTTGTTTATGCCAAACCTTCTGTTAGTTCTACTGTTGGATTTGTCGGTCCCGGAGCTGCTGAGGTTTTGCCTATTGTGGATGCTGATTTGAAAAAAACTGCTACTTTAGTTATTGACGAAGCTAAAGAAATCTGCACCAAGAGATCGGTAAAAGACATAGTAGTGGAAGTGGTGGAAGGTGATGCTAGAAATGTTCTCTGTGATGCTGTGGAGAAGCACCATGCATCAATATTGGTTCTTGGTAGTCATGGTTATGGGGCTATAAAAAGGGCGGTATTAGGCAGTGTAAGTGACTACTGTGCTCATCATGCTCATTGCACTGTGATGATCGTGAAGAAGCCAAAAACCAAACACTGA 486 0.4156 MAQVSEKQVMVVGIDDSNYSSYALEWTLDHLITTLPNPIFKLVLVYAKPSVSSTVGFVGPGAAEVLPIVDADLKKTATLVIDEAKEICTKRSVKDIVVEVVEGDARNVLCDAVEKHHASILVLGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0527 161 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 4 161 - -
Tpr6g0527 161 Pfam Universal stress protein family 9 155 IPR006016 -
Tpr6g0527 161 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 157 - -
Tpr6g0527 161 CDD USP_Like 10 154 - -
Tpr6g0527 161 PRINTS Universal stress protein signature 7 25 IPR006015 -
Tpr6g0527 161 PRINTS Universal stress protein signature 115 127 IPR006015 -
Tpr6g0527 161 PRINTS Universal stress protein signature 133 155 IPR006015 -
Tpr6g0527 161 Gene3D HUPs 1 161 IPR014729 -
Tpr6g0527 161 PANTHER - 4 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0527 Tpr-Chr6 4306704 4308694 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0527 - - jre:108986860 251.906